| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2006 |
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| Symbol | |
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| ID | 4091168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 2212951 |
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| End bp | 2214432 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638015285 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_621880 |
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| Protein GI | 107023553 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC GATTCCTTGC GCGCGGCACC GTCGCGGTCG CCGTGGCGGC CGCCCTGTCG
GCAGGCTATT TCGCCGGTAC CCGCCGCGCC GATCCGCAGA TCATCACGCC CGCGCAGGCC
GCGATGATGC CGGCCGAAGC CGCGGCCAAG ACCGGCATTC CCGATTTCTC CGGGCTCGTC
GAGACGTACG GCCCGGCGGT CGTGAACATC AGCGCGAAGC ACGTCGTGAA GCAGGTGTCG
CGGCGCGCGC CGCAGCCGCA ACTGCCGATC GATCCGAGCG ACCCGTTCTA CCAGTTCTTC
AAGCACTTCT ACGGCCAGGT GCCGGGCATG GGCGGCGACG CGCAGCCGGA CGACCAGCCG
AGCGCGAGCC TCGGGTCGGG CTTCATCGTC AGCGCCGACG GGTACATCCT CACCAACGCG
CACGTGATCG ACGGCGCGAA CGTCGTCACG GTCAAGCTGA CCGACAAGCG CGAATACAAG
GCGAAGGTCG TCGGCTCCGA CAAGCAGTCC GACGTCGCCG TGCTGAAGAT CGACGCGAGC
GGCCTGCCGA CCGTGAAGAT CGGCGACCCG GCGCAGAGCA AGGTCGGCCA GTGGGTCGTC
GCGATCGGCT CGCCGTACGG CTTCGACAAC ACGGTCACGT CGGGCATCAT CAGCGCGAAG
TCGCGCGCGC TGCCGGACGA GAACTACACG CCGTTCATCC AGACCGACGT GCCGGTGAAC
CCCGGCAACT CGGGCGGCCC GCTGTTCAAC CTGCAGGGCG AGGTGATCGG TATCAACTCG
ATGATCTACT CGCAGACGGG CGGCTTCCAG GGCCTGTCGT TCGCGATCCC GATCAACGAG
GCGATCAAGG TGAAGGACGA GCTCGTGAAG ACGGGCCACG TGAGCCGCGG CCGTCTCGGC
GTGGCCGTGC AGGGGCTGAA CCAGACGCTC GCGAGCTCGT TCGGGCTGCA GAAGCCGGAC
GGCGCGCTCG TCAGCTCGGT CGACCCCAAC GGCCCGGCCG CGAAGGCCGG CCTGCAGCCG
GGCGACGTGA TCCTGTCGGT CAACGGTTCG CCGGTCGCCG ATTCGACGTC GCTGCCCGCG
CAGATCGCGA ACCTGAAGCC GGGTTCGAAG GCCGACCTGC AGATCTGGCG CGACAAGTCG
AAGAAGTCGA TCAGCGTGAC GCTCGGCGCG ATGGCCGATG CGAAGCTCGC GTCGAACGAC
GGCGGGCCGG TGGAGCAGGG GCGCCTGGGT GTCGCGGTGC GGCCGCTGTC GCCTCAGGAG
CGCACCGCCG ACAACCTGTC GCACGACCTG ATCGTGCAGC AGGCCGGCGG GCCGGCCGCC
AACGCGGGCA TCCAGCCGGG CGACGTGATT CTCGCGGTCA ACGGCCGCCC GGTCACGAGC
CCGGAGCAAT TGCGCGACGC GGTGAAGGGC GCGGGCAACA GTCTTGCTCT GCTGATCCAG
CGCGATAATG CACAGATCTT CGTGCCGGTC GACCTGAGCT GA
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| Protein sequence | MNTRFLARGT VAVAVAAALS AGYFAGTRRA DPQIITPAQA AMMPAEAAAK TGIPDFSGLV
ETYGPAVVNI SAKHVVKQVS RRAPQPQLPI DPSDPFYQFF KHFYGQVPGM GGDAQPDDQP
SASLGSGFIV SADGYILTNA HVIDGANVVT VKLTDKREYK AKVVGSDKQS DVAVLKIDAS
GLPTVKIGDP AQSKVGQWVV AIGSPYGFDN TVTSGIISAK SRALPDENYT PFIQTDVPVN
PGNSGGPLFN LQGEVIGINS MIYSQTGGFQ GLSFAIPINE AIKVKDELVK TGHVSRGRLG
VAVQGLNQTL ASSFGLQKPD GALVSSVDPN GPAAKAGLQP GDVILSVNGS PVADSTSLPA
QIANLKPGSK ADLQIWRDKS KKSISVTLGA MADAKLASND GGPVEQGRLG VAVRPLSPQE
RTADNLSHDL IVQQAGGPAA NAGIQPGDVI LAVNGRPVTS PEQLRDAVKG AGNSLALLIQ
RDNAQIFVPV DLS
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