Gene Bcen_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2006 
Symbol 
ID4091168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2212951 
End bp2214432 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content69% 
IMG OID638015285 
Productpeptidase S1C, Do 
Protein accessionYP_621880 
Protein GI107023553 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC GATTCCTTGC GCGCGGCACC GTCGCGGTCG CCGTGGCGGC CGCCCTGTCG 
GCAGGCTATT TCGCCGGTAC CCGCCGCGCC GATCCGCAGA TCATCACGCC CGCGCAGGCC
GCGATGATGC CGGCCGAAGC CGCGGCCAAG ACCGGCATTC CCGATTTCTC CGGGCTCGTC
GAGACGTACG GCCCGGCGGT CGTGAACATC AGCGCGAAGC ACGTCGTGAA GCAGGTGTCG
CGGCGCGCGC CGCAGCCGCA ACTGCCGATC GATCCGAGCG ACCCGTTCTA CCAGTTCTTC
AAGCACTTCT ACGGCCAGGT GCCGGGCATG GGCGGCGACG CGCAGCCGGA CGACCAGCCG
AGCGCGAGCC TCGGGTCGGG CTTCATCGTC AGCGCCGACG GGTACATCCT CACCAACGCG
CACGTGATCG ACGGCGCGAA CGTCGTCACG GTCAAGCTGA CCGACAAGCG CGAATACAAG
GCGAAGGTCG TCGGCTCCGA CAAGCAGTCC GACGTCGCCG TGCTGAAGAT CGACGCGAGC
GGCCTGCCGA CCGTGAAGAT CGGCGACCCG GCGCAGAGCA AGGTCGGCCA GTGGGTCGTC
GCGATCGGCT CGCCGTACGG CTTCGACAAC ACGGTCACGT CGGGCATCAT CAGCGCGAAG
TCGCGCGCGC TGCCGGACGA GAACTACACG CCGTTCATCC AGACCGACGT GCCGGTGAAC
CCCGGCAACT CGGGCGGCCC GCTGTTCAAC CTGCAGGGCG AGGTGATCGG TATCAACTCG
ATGATCTACT CGCAGACGGG CGGCTTCCAG GGCCTGTCGT TCGCGATCCC GATCAACGAG
GCGATCAAGG TGAAGGACGA GCTCGTGAAG ACGGGCCACG TGAGCCGCGG CCGTCTCGGC
GTGGCCGTGC AGGGGCTGAA CCAGACGCTC GCGAGCTCGT TCGGGCTGCA GAAGCCGGAC
GGCGCGCTCG TCAGCTCGGT CGACCCCAAC GGCCCGGCCG CGAAGGCCGG CCTGCAGCCG
GGCGACGTGA TCCTGTCGGT CAACGGTTCG CCGGTCGCCG ATTCGACGTC GCTGCCCGCG
CAGATCGCGA ACCTGAAGCC GGGTTCGAAG GCCGACCTGC AGATCTGGCG CGACAAGTCG
AAGAAGTCGA TCAGCGTGAC GCTCGGCGCG ATGGCCGATG CGAAGCTCGC GTCGAACGAC
GGCGGGCCGG TGGAGCAGGG GCGCCTGGGT GTCGCGGTGC GGCCGCTGTC GCCTCAGGAG
CGCACCGCCG ACAACCTGTC GCACGACCTG ATCGTGCAGC AGGCCGGCGG GCCGGCCGCC
AACGCGGGCA TCCAGCCGGG CGACGTGATT CTCGCGGTCA ACGGCCGCCC GGTCACGAGC
CCGGAGCAAT TGCGCGACGC GGTGAAGGGC GCGGGCAACA GTCTTGCTCT GCTGATCCAG
CGCGATAATG CACAGATCTT CGTGCCGGTC GACCTGAGCT GA
 
Protein sequence
MNTRFLARGT VAVAVAAALS AGYFAGTRRA DPQIITPAQA AMMPAEAAAK TGIPDFSGLV 
ETYGPAVVNI SAKHVVKQVS RRAPQPQLPI DPSDPFYQFF KHFYGQVPGM GGDAQPDDQP
SASLGSGFIV SADGYILTNA HVIDGANVVT VKLTDKREYK AKVVGSDKQS DVAVLKIDAS
GLPTVKIGDP AQSKVGQWVV AIGSPYGFDN TVTSGIISAK SRALPDENYT PFIQTDVPVN
PGNSGGPLFN LQGEVIGINS MIYSQTGGFQ GLSFAIPINE AIKVKDELVK TGHVSRGRLG
VAVQGLNQTL ASSFGLQKPD GALVSSVDPN GPAAKAGLQP GDVILSVNGS PVADSTSLPA
QIANLKPGSK ADLQIWRDKS KKSISVTLGA MADAKLASND GGPVEQGRLG VAVRPLSPQE
RTADNLSHDL IVQQAGGPAA NAGIQPGDVI LAVNGRPVTS PEQLRDAVKG AGNSLALLIQ
RDNAQIFVPV DLS