| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1984 |
|---|
| Symbol | |
|---|
| ID | 4091146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2187351 |
|---|
| End bp | 2188304 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638015263 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_621858 |
|---|
| Protein GI | 107023531 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0845321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCACC TGCGTCTTCC CCTGAGTCAC GCTCACGCGC CGTCGGTCGG CGACGCGTCG
TCGCCGCCCG GCGCCCCGCG CCGCGCGCGC GGCGGCGCGA GCTGGCTCGT GTCGCCGTCC
GTCGCGGTGC TGCTGCTGTG GATGTCGATT CCGCTCGCGA TGACGATCTG GTATTCGTTC
TCGCGCTACA ACCTGCTGAA CCCGGACGTG AAGGGCTTCG CCGGGTTCGA CAACTACCGC
TTCCTCGCGA CCGATCCGTC GTTCCTGCCG GCGATCTGGC ACACGCTGGT GCTGATCGGC
GCGGTGCTCG CGATCACCGT GATCGGCGGC GTGCTGATGG CCGTGCTGTT CGACCGCAAG
TTCTACGGGC AGGGCGTCGC GCGGCTGCTC GCGATCGCGC CGTTCTTCGT GATGCCGACC
GTCTCCGCGC TGATCTGGAA GAACATGATC CTGCATCCGG TGTACGGGCT CGTCGCGAAC
GCGATGCGCG CGCTCGGGAT GACGCCGATC GACTGGTTCG CCGATTACCC GTTGACCGCC
GTGATCATCA TCGTCGCGTG GCAGTGGCTG CCGTTCGCGT TCCTGATCCT GTTCACCGCG
ATCCAGTCGC TCGACCAGGA GCAGAAGGAG GCCGCGCGCA TCGACGGCGC CGGCCCGATC
GCGATGTTCT TCTACATCAC GCTGCCGCAC CTGAAGCGCG CGATCGCCGT GGTCGTGATG
ATGGAGACGA TCTTCCTGCT GTCGATCTTC GCGGAAATCT ATACGACGAC CGGCGGCGGC
CCGGGCGACG CGACGACCAA CCTGTCGTAC CTGATCTATG CGCTCGGCCT GCAGCAGTTC
GACGTCGGCC TCGCATCCGC GGGCGGCATC ATCGCCGTCG TGGTCGCGAA CGTCGTGTCG
TTCTTCCTCG TGCGGATGCT CGCGCGCAAC CTGAAGGGAG AGTACGAAAA ATGA
|
|---|
| Protein sequence | MRHLRLPLSH AHAPSVGDAS SPPGAPRRAR GGASWLVSPS VAVLLLWMSI PLAMTIWYSF
SRYNLLNPDV KGFAGFDNYR FLATDPSFLP AIWHTLVLIG AVLAITVIGG VLMAVLFDRK
FYGQGVARLL AIAPFFVMPT VSALIWKNMI LHPVYGLVAN AMRALGMTPI DWFADYPLTA
VIIIVAWQWL PFAFLILFTA IQSLDQEQKE AARIDGAGPI AMFFYITLPH LKRAIAVVVM
METIFLLSIF AEIYTTTGGG PGDATTNLSY LIYALGLQQF DVGLASAGGI IAVVVANVVS
FFLVRMLARN LKGEYEK
|
|---|
| |