Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1983 |
Symbol | |
ID | 4091145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2186503 |
End bp | 2187354 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638015262 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_621857 |
Protein GI | 107023530 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.062126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC TGACCTTGGC AGGCCGGCGC ACGCCGGCCG TGTTCGATCT CGTGCGGCGC GCGCTGCCCG GTACGCTCGC GTGGCTGATC GCGCTCCTGC TGTTCTTCCC GATCTTCTGG ATGGCGATCA CCGCGTTCAA GACCGAACAG CAGGCGTACG CGTCGACGCT GTTCTTCATG CCGACGCTGG ACAGCTTCCG CGAGGTGTTC GCGCGCAGCA ACTACTTCGG GTTCGCGTGG AATTCGATCC TGATCTCGGC CGGCGTCACG GTGATCTCGC TGCTGTTCGC GGTGCCGGCC GCGTACGCGA TGGCGTTCTT CCCGAACCAC CGCACGCAGA AGGTGCTGCT GTGGATGCTG TCGACCAAGA TGATGCCGTC AGTCGGCGTG CTGGTGCCGA TCTACCTGCT GTGGAAGAAC GCGGGGCTGC TCGATACCGT GTCGGGGCTC GTGATCGTCT ATACGCTGAT CAACCTGCCG ATCGCGGTGT GGATGACCTT CACGTACTTC AACGAGATCC CGAAGGACAT CCTGGAAGCC GGGCGCATCG ACGGCGCGTC GACGTGGCAG GAGATCGTCT ACCTGCTGAT GCCGATGGCG CTACCGGGGC TCGCGTCCAC CGCGCTGCTG CTCGTGATCC TGTCGTGGAA CGAGGCGTTC TGGAGCATCA ACCTGTCGAG CTCGAACGCG GCGCCGTTGA CGGTGTTCAT CGCGTCGTAC TCGAGCCCCG AAGGGCTGTT CTGGGCGAAG CTGTCCGCGG CTTCGCTGCT CGCGGTCGCG CCGATCCTGA TCGTCGGCTG GCTGTCGCAG AAGCAGCTCG TGCGCGGGCT CACGTTCGGG GCGGTTAAAT GA
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Protein sequence | MSDLTLAGRR TPAVFDLVRR ALPGTLAWLI ALLLFFPIFW MAITAFKTEQ QAYASTLFFM PTLDSFREVF ARSNYFGFAW NSILISAGVT VISLLFAVPA AYAMAFFPNH RTQKVLLWML STKMMPSVGV LVPIYLLWKN AGLLDTVSGL VIVYTLINLP IAVWMTFTYF NEIPKDILEA GRIDGASTWQ EIVYLLMPMA LPGLASTALL LVILSWNEAF WSINLSSSNA APLTVFIASY SSPEGLFWAK LSAASLLAVA PILIVGWLSQ KQLVRGLTFG AVK
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