Gene Bcen_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1979 
Symbol 
ID4092511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2182415 
End bp2183611 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID638015258 
Productbeta-lactamase 
Protein accessionYP_621853 
Protein GI107023526 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.663801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAC TGCCTGTCAC CGCCCGCCGC GCCGAACCGG ATGCCGCGCT GCGCGCCCGG 
CTCGATGCCG TGCTCGACCG CGCGCTGGCC GATGCGCGCG CGGTCGGCGC GGTCGTGCTG
GTCGCGCGCG ACGGCGAATT GCGTTATGCA CGCGCGGCCG GGCTGGCCGA TCGCGAAGCC
GGCACGCCGA TGCGCGAGGA CACGCTGTTC CGGCTCGCGT CGGTATCCAA GCCGATCGTG
ACGGCCGCCG CGATGCGGCT GGTCGCGGCA TCGAAGATCG GGCTCGACGA GCCGGTCGCG
CGCTGGCTGC CCGCGTTCAC GCCGACGCTC GCGGACGGCA CGCCGGCGAA CATCACGCTG
CGGCATCTGC TGTCGCACAC GGCCGGGCTC GGCTATCGCT TTCTCGAAGC CGACGCCGAC
GGCCCGTATG CACGCGCGGG CGTGTCCGAC GGGATGGATC GCGCGAGCCT GTCGCTCGCC
GAGAACGTGC GGCGCATCGC CGGCGTGCCG CTGCAGTTCG CGCCCGGCAC GTCGTGGGGC
TACTCGCTTG CGACCGACGT GGTCGGCGCG CTGATCGAGG CGGTCGACGG CCGCCCGCTC
GCCGACGCCG TGGCGGCGCT CGTGACGACG CCGCTCGGGA TGGCCGACAC GGCATTTTTC
ACGCATGACG CGGCGCGTCT GGCGACGCCT TACGTCAGCA CGCCCGACGT GCCGCGCCGG
ATGGCGGACG ACGATCTCGT GCCGGTGTTC GACGGCACGG TCGGTATCCG CTTCGAGCCG
GCGCGCGCGT TCGACGCGAC CGCGTGGCCG TCGGGCGGCG CGGGCATGGT CGGCACCGCG
CACGATTGCC TGACGCTGCT CGATACGCTG CGCACGGGCC TCGACGGCTG GCTCGCACCG
CGCTGGATCG ACGAGATGGC GCGGGTGCAG CCGGGCGCGC ACGACTTGCC GGATGCGCCG
GGATTCGGTT TCGGACTCGG TTTTTCCGTG CTGCATGACC CGGTGGCCGC GCAATCGCCG
GAGTCGGTCG GCACCTGGCG CTGGGGCGGT GCGTACGGGC ATGCGTGGTT CGTCGACCGC
GCAGCCGGGC TGACGGTCGT CGCACTGACC AATACGTTAT ACGAAGGGAT GCACGGGCGC
ATCGTCACCG ACGTGCGCGA TGCGGTGTAT GGCATCGACG ACCGGAGCGC GGCATGA
 
Protein sequence
MSSLPVTARR AEPDAALRAR LDAVLDRALA DARAVGAVVL VARDGELRYA RAAGLADREA 
GTPMREDTLF RLASVSKPIV TAAAMRLVAA SKIGLDEPVA RWLPAFTPTL ADGTPANITL
RHLLSHTAGL GYRFLEADAD GPYARAGVSD GMDRASLSLA ENVRRIAGVP LQFAPGTSWG
YSLATDVVGA LIEAVDGRPL ADAVAALVTT PLGMADTAFF THDAARLATP YVSTPDVPRR
MADDDLVPVF DGTVGIRFEP ARAFDATAWP SGGAGMVGTA HDCLTLLDTL RTGLDGWLAP
RWIDEMARVQ PGAHDLPDAP GFGFGLGFSV LHDPVAAQSP ESVGTWRWGG AYGHAWFVDR
AAGLTVVALT NTLYEGMHGR IVTDVRDAVY GIDDRSAA