Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1979 |
Symbol | |
ID | 4092511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2182415 |
End bp | 2183611 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638015258 |
Product | beta-lactamase |
Protein accession | YP_621853 |
Protein GI | 107023526 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.663801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAC TGCCTGTCAC CGCCCGCCGC GCCGAACCGG ATGCCGCGCT GCGCGCCCGG CTCGATGCCG TGCTCGACCG CGCGCTGGCC GATGCGCGCG CGGTCGGCGC GGTCGTGCTG GTCGCGCGCG ACGGCGAATT GCGTTATGCA CGCGCGGCCG GGCTGGCCGA TCGCGAAGCC GGCACGCCGA TGCGCGAGGA CACGCTGTTC CGGCTCGCGT CGGTATCCAA GCCGATCGTG ACGGCCGCCG CGATGCGGCT GGTCGCGGCA TCGAAGATCG GGCTCGACGA GCCGGTCGCG CGCTGGCTGC CCGCGTTCAC GCCGACGCTC GCGGACGGCA CGCCGGCGAA CATCACGCTG CGGCATCTGC TGTCGCACAC GGCCGGGCTC GGCTATCGCT TTCTCGAAGC CGACGCCGAC GGCCCGTATG CACGCGCGGG CGTGTCCGAC GGGATGGATC GCGCGAGCCT GTCGCTCGCC GAGAACGTGC GGCGCATCGC CGGCGTGCCG CTGCAGTTCG CGCCCGGCAC GTCGTGGGGC TACTCGCTTG CGACCGACGT GGTCGGCGCG CTGATCGAGG CGGTCGACGG CCGCCCGCTC GCCGACGCCG TGGCGGCGCT CGTGACGACG CCGCTCGGGA TGGCCGACAC GGCATTTTTC ACGCATGACG CGGCGCGTCT GGCGACGCCT TACGTCAGCA CGCCCGACGT GCCGCGCCGG ATGGCGGACG ACGATCTCGT GCCGGTGTTC GACGGCACGG TCGGTATCCG CTTCGAGCCG GCGCGCGCGT TCGACGCGAC CGCGTGGCCG TCGGGCGGCG CGGGCATGGT CGGCACCGCG CACGATTGCC TGACGCTGCT CGATACGCTG CGCACGGGCC TCGACGGCTG GCTCGCACCG CGCTGGATCG ACGAGATGGC GCGGGTGCAG CCGGGCGCGC ACGACTTGCC GGATGCGCCG GGATTCGGTT TCGGACTCGG TTTTTCCGTG CTGCATGACC CGGTGGCCGC GCAATCGCCG GAGTCGGTCG GCACCTGGCG CTGGGGCGGT GCGTACGGGC ATGCGTGGTT CGTCGACCGC GCAGCCGGGC TGACGGTCGT CGCACTGACC AATACGTTAT ACGAAGGGAT GCACGGGCGC ATCGTCACCG ACGTGCGCGA TGCGGTGTAT GGCATCGACG ACCGGAGCGC GGCATGA
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Protein sequence | MSSLPVTARR AEPDAALRAR LDAVLDRALA DARAVGAVVL VARDGELRYA RAAGLADREA GTPMREDTLF RLASVSKPIV TAAAMRLVAA SKIGLDEPVA RWLPAFTPTL ADGTPANITL RHLLSHTAGL GYRFLEADAD GPYARAGVSD GMDRASLSLA ENVRRIAGVP LQFAPGTSWG YSLATDVVGA LIEAVDGRPL ADAVAALVTT PLGMADTAFF THDAARLATP YVSTPDVPRR MADDDLVPVF DGTVGIRFEP ARAFDATAWP SGGAGMVGTA HDCLTLLDTL RTGLDGWLAP RWIDEMARVQ PGAHDLPDAP GFGFGLGFSV LHDPVAAQSP ESVGTWRWGG AYGHAWFVDR AAGLTVVALT NTLYEGMHGR IVTDVRDAVY GIDDRSAA
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