| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1974 |
|---|
| Symbol | |
|---|
| ID | 4092506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2176030 |
|---|
| End bp | 2176941 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638015253 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_621848 |
|---|
| Protein GI | 107023521 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTCG ATCTCCGACA GTTGCGTGCG TTCACCACGA TCGTCGCGTG CGGCAGCCTC
GGCCGCGCGG CCGACGCGCT GCACGTCACG CAGCCGGCGC TGAGCCGGAT CCTGAAGCGG
CTCGAGGATC AGGTCGGCGC GCCGCTGTTC GAACGCCATT CGAAGGGCGT GCAGCTCACC
GCGTTCGGCG AAGCGTTGCT GCCGCACGCG ACGCTGCTGC AGCACGAGGC CGAGCATGCG
CGCGAGGAAC TGGACGCGAT GCGCGGGCTC GCGAAGGGCA CGATCAAGGT CGGCACGGTG
GGCAGCATCG CGAGCCTCGT GTTGCCGGTC GCGGTCGGCC GCGTGCTCGA TCGCTGGCCG
AACCTGCGCG TCGAAATCAT CGAAGGCGTG TGGGACCGGC TCGCGGAAGG GCTGATCAAG
CACGAGATCG ATCTTGCGCT GTCCGCGCAC GGGCCCGATA CCGACGAGAT CGTCGCGATT
CCCGAGTGCC GCTGGGAAGA CCGCAGCCAT ATCGTTGCGG CGCCGCACCA TCCGCTGCGC
GTGCTCGGCC GCCCGCCGAC GCTCGCCGAT ACGCTGCACG CACGCTGGGC GATTCCGCCG
CGCGGCACCG CGCCGTTCGA CCACATGCGC GCGACCTTCG ACGCACACGG GCTGCCGTTG
CCCGACATCG CGGTCGAGAC GCGCTCGGTC ACGACGCTGA AAAGCCTGGT CGCGCATGCG
GGATTCCTCT GCTGGATGGC CGAACCGATG TACGGGGCGG AACGACGCGC CGGCACGATC
GACACGCTGC CCGTGCGCGA AGTCGTCGCA GTGCGCACGC TCACCGCGTT CCGGCGCCGT
CACGGCATCC TCCCCGGGCC GACCGGCAAG CTGCTCGACG AACTCGTCGC ACTCACGCGC
GAAGGGCGCT GA
|
|---|
| Protein sequence | MTFDLRQLRA FTTIVACGSL GRAADALHVT QPALSRILKR LEDQVGAPLF ERHSKGVQLT
AFGEALLPHA TLLQHEAEHA REELDAMRGL AKGTIKVGTV GSIASLVLPV AVGRVLDRWP
NLRVEIIEGV WDRLAEGLIK HEIDLALSAH GPDTDEIVAI PECRWEDRSH IVAAPHHPLR
VLGRPPTLAD TLHARWAIPP RGTAPFDHMR ATFDAHGLPL PDIAVETRSV TTLKSLVAHA
GFLCWMAEPM YGAERRAGTI DTLPVREVVA VRTLTAFRRR HGILPGPTGK LLDELVALTR
EGR
|
|---|
| |