Gene Bcen_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1954 
Symbol 
ID4092487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2156393 
End bp2157274 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID638015235 
ProductPirin-like 
Protein accessionYP_621830 
Protein GI107023503 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0828005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACT CGATCAAAGC CCTGCTGAAG CCGCACGTGC GCGACATCGG CAACCTGCAG 
GTGCGCCGCA CGCTGCCCGC GCTCGCCGCA CGCCTCGTCG GCCCGTTCAT CTTCTTCGAT
CACATGGGGC CCGCCACGCT GTCCGCCGGC ACGGGGCTCG ACGTGCGCCC GCATCCGCAC
ATCGGGCTCG CGACGGTCAC CTACCTGTTC GACGGCGCGA TCCTGCACCG CGACAGCCTC
GGCTCGCTGC AGGAAATCGT GCCGGGCGAC GTGAACTGGA TGACGGCCGG CCGCGGCATC
GTCCACTCCG AGCGCACGCC GGACGCGCAG CGCGCGAGCG GCCACACCGT GCACGGCATC
CAGACCTGGG TTGCGCTGCC GCAGGCGCAC GAGACGACCG AGCCGTCGTT CGAGCACCAC
GCGGCCGACA CGCTGCCCAA GCGCGACGAA GACGGCGTGG CGCTGACCGT GATCGCCGGC
GACGCGTTCG GGTTGCGCTC GCCCGTGACG ACGTTCTCGC GCACGCTGTA CGTCGCGGCC
GAATTCGCGG CCGGCGGCCG GCTCGAACTC GATGCATCGC ACGAGGAGCG CGCGGTCTAC
GTGGTCGACG GCGCGCTCGC GATCGACGGC ACGCCGGTAC CGGCCGAACA GATGGCCGTG
CTCGCGCCGG GCGCGACGGT CACGCTGACG AGCGCCAGCG GCGCGCGCGC GATGCTGCTC
GGCGGCGACC GGATGGACGG CGAACGCTTC ATCGAGTGGA ATTTCGTCGC GAGCAGCCGC
GACGCGATCG AGCGGGCGAA AGCGGCGTGG ACGCGCCAGG AAATGGGCAA GGTGCCTGGC
GAGACGGAAT GGATTCCGCT GCCCGAAGCG AAGCCGCGTT GA
 
Protein sequence
MTDSIKALLK PHVRDIGNLQ VRRTLPALAA RLVGPFIFFD HMGPATLSAG TGLDVRPHPH 
IGLATVTYLF DGAILHRDSL GSLQEIVPGD VNWMTAGRGI VHSERTPDAQ RASGHTVHGI
QTWVALPQAH ETTEPSFEHH AADTLPKRDE DGVALTVIAG DAFGLRSPVT TFSRTLYVAA
EFAAGGRLEL DASHEERAVY VVDGALAIDG TPVPAEQMAV LAPGATVTLT SASGARAMLL
GGDRMDGERF IEWNFVASSR DAIERAKAAW TRQEMGKVPG ETEWIPLPEA KPR