Gene Bcen_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1907 
Symbol 
ID4091649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2105166 
End bp2107466 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content64% 
IMG OID638015188 
ProductATP-dependent Clp protease ATP-binding subunit clpA 
Protein accessionYP_621783 
Protein GI107023456 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.298662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCC AGGAATTGGA AGTCAGCCTG CACATGGCGT TCATGGAAGC ACGCCAGGCG 
CGCCATGAGT TCATTACGGT CGAGCACCTG CTGCTGGCCC TGCTGGATAA TCCGACGGCA
GCCGAGGTGT TGCGCGCGTG TGCGGCCAAC ATTGAGGACT TGCGTCAGAA CCTGCGCAAT
TTCATCCACG ACAACACACC TACCGTCCCG GGTACCGACG ACGTCGATAC CCAGCCGACG
CTCGGTTTCC AGCGTGTGAT CCAGCGCGCG ATCATGCACG TCCAGTCGAC GTCGAACGGC
AAGAAGGAAG TCACCGGCGC GAACGTGCTG GTCGCGATCT TCGGCGAGAA GGATTCGCAT
GCCGTGTACT ACCTGCAGCA GCAGGGCGTC ACGCGTCTCG ACGTGGTGAA CTTCATTTCG
CACGGCATCG CGAAGACGAA CAACGGCGAA GCCGCGAAGT CGACCGATGC GAACGCGGAA
AGCGAAGACG CGAACGCGCA GAAGGAAACC CCGCTCGCGC AGTTCACGCA GAACCTCAAC
CAGATGGCGA AGGACGGCCG CATCGATCCG CTGATCGGTC GCGAGCCCGA GGTCGAGCGC
GTCGTGCAGG TGCTGTGCCG TCGCCGCAAG AACAACCCGC TGCTCGTCGG CGAAGCCGGC
GTCGGCAAGA CCGCGATCGC GGAAGGGCTC GCGTATCGCA TCACGCGCGG CGAAGTGCCG
GACATCCTCG CGAACGCGCA GGTGTACTCG CTCGACATGG GCGCGCTGCT CGCGGGCACC
AAGTATCGCG GCGATTTCGA GCAGCGGCTG AAGACGGTGC TGAAGGAGCT CAAGGAGCGC
CCGCACGCGA TCCTGTTCAT CGACGAAATC CATACGCTGA TCGGCGCGGG CGCCGCGTCG
GGCGGCACGC TCGATGCGTC GAACCTGCTG AAGCCGGCGT TGTCGTCGGG CACGCTCAAG
TGCATCGGCG CGACCACGTT CACCGAGTAT CGCGGCATCT TCGAGAAGGA TGCGGCGCTG
TCGCGGCGCT TCCAGAAGGT GGACGTGACG GAGCCGAGCG TCGAGCAGAC GGTCGCGATC
CTGCGCGGGC TGAAATCGCG CTTCGAGGAG CATCACGGCG TCAAGTATTC GTCGGGCGCC
CTGTCGGCCG CGGCCGAGCT GTCGGCGCGC TTCATCACCG ACCGTCACCT GCCGGACAAG
GCGATCGACG TGATCGACGA GGCGGGCGCC GCGCAGCGCA TCCTGCCGAA GTCGAAGCAG
AAGAAGACGA TCGGCAAGAG CGAGATCGAG GAAATCATCT CGAAGATCGC GCGCGTGCCG
GCGCAAAGCG TGTCGCAGGA CGATCGCAGC AAGCTGCAGA CGCTCGACCG CGACCTGAAG
AGCGTCGTGT TCGGCCAGGA CCCGGCGATC GATGCGCTCG CGGCGTCGAT CAAGATGGCG
CGCGCGGGCC TCGGCAAGAT GGACAAGCCG ATCGGCGCGT TCCTGTTCTC CGGCCCGACG
GGTGTCGGCA AGACCGAAGT GGCGCGCCAG CTCGCGTTCA CGCTCGGCAT CGAGCTGATC
CGCTTCGACA TGTCTGAATA CATGGAGCGT CACGCGGTGA GCCGGCTGAT CGGCGCGCCG
CCGGGCTACG TCGGGTTCGA CCAGGGCGGC CTCCTGACCG AAGCCGTCAC GAAGAAGCCG
CATTGCGTGC TGCTGCTCGA CGAAATCGAG AAGGCGCATC CGGACATCTT CAACGTGCTG
CTGCAGGTGA TGGACCACGG CACGCTGACG GACAACAACG GCCGCAAGGC GGATTTCCGC
AACGTCATCA TCATCATGAC GACGAACGCG GGCGCCGAGT CGATGCAGAA GGCGACGATC
GGCTTCACGA CGCGCCGCGA AGCCGGCGAC GAGATGACCG ACATCAAGCG CCTGTTCACG
CCGGAGTTCC GCAACCGTCT GGATTCGATC ATCAGCTTCC GCTCGCTCGA TGAGGAAATC
ATCATGCGCG TGGTCGACAA GTTCCTGATC CAGCTCGAGG AACAGCTGCA CGAGAAGAAG
GTCGACGCGC TCTTCACCGA CGCGTTGCGC AAGCATCTCG CGAAGCATGG CTTCGACCCG
CTGATGGGCG CGCGGCCGAT GCAGCGGCTG ATCCAGGACA CGATCCGGCG CGCGCTGGCC
GACGAACTGC TGTTCGGCAA GCTGCTCAAC GGCGGCCACG TGACGGTCGA CGTCGACGAA
AGCGACAAGG TGCAGTTGTC GTTCGACAAG CTGGCGAATC CGCCGCACAA GCCGAACGAA
GAGACGGTCG AAGTCGAGTA A
 
Protein sequence
MIAQELEVSL HMAFMEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRQNLRN 
FIHDNTPTVP GTDDVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIAKTNNGE AAKSTDANAE SEDANAQKET PLAQFTQNLN
QMAKDGRIDP LIGREPEVER VVQVLCRRRK NNPLLVGEAG VGKTAIAEGL AYRITRGEVP
DILANAQVYS LDMGALLAGT KYRGDFEQRL KTVLKELKER PHAILFIDEI HTLIGAGAAS
GGTLDASNLL KPALSSGTLK CIGATTFTEY RGIFEKDAAL SRRFQKVDVT EPSVEQTVAI
LRGLKSRFEE HHGVKYSSGA LSAAAELSAR FITDRHLPDK AIDVIDEAGA AQRILPKSKQ
KKTIGKSEIE EIISKIARVP AQSVSQDDRS KLQTLDRDLK SVVFGQDPAI DALAASIKMA
RAGLGKMDKP IGAFLFSGPT GVGKTEVARQ LAFTLGIELI RFDMSEYMER HAVSRLIGAP
PGYVGFDQGG LLTEAVTKKP HCVLLLDEIE KAHPDIFNVL LQVMDHGTLT DNNGRKADFR
NVIIIMTTNA GAESMQKATI GFTTRREAGD EMTDIKRLFT PEFRNRLDSI ISFRSLDEEI
IMRVVDKFLI QLEEQLHEKK VDALFTDALR KHLAKHGFDP LMGARPMQRL IQDTIRRALA
DELLFGKLLN GGHVTVDVDE SDKVQLSFDK LANPPHKPNE ETVEVE