Gene Bcen_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1898 
Symbol 
ID4093101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2094454 
End bp2095719 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID638015179 
ProductFmu (Sun) 
Protein accessionYP_621774 
Protein GI107023447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC ACGGATTCCT GATTGGCCAG ACCGAAACCC TGCTCGCCGA GGTGCTGAAG 
TTCGCCGGCC CCGCCGACGC GACGACGAGC CGGTTCTTCC GCGCGCACCC GAAGCTCGGG
CATGCCGAGC GCGGCGTGAT CGCCGAGGCC GTGTTCGCGG TGCTGCGCCG GAAGATGGAG
TTCTCGCATC TCGCCGAGAG CGGCACCGGC ACGCCCGCGC GGCGTCTCAC GCTGCTCGGC
CTGATGCAGA CGATGGGGCG CAATGCGCTG AAGCCGTTCC TGTCCGACAC CGAGTCCGCG
TGGCTCGAGC ACGTGTCGAA GATCGATCCG GCGAGCCTGC CCGTGCGCAT TCGCACGAAC
CTGCCCGACT GGATTCACCA GGCGCTGTCG GAGCGTTTCG ACGCCGAGGA ACTCGCGCAG
CTCGCCGCTG CGCTGAACTA CCCGGCGCCG CTCGACCTGC GTGCCAACGC GCAGAAGGCG
ACCCGCGACC AGGTGATCGA AGCGCTGCGC GTGAGCGGCA TCGAAGCGGG CGCGACGCCG
TTCGCGCCGT TCGGCGTGCG CGTGGTCGGC AAGCCGGCGC TGACGCGCCT GAAGCTGTTC
GAGGAAGGCG CGATCGAGGT GCAGGACGAA GGCAGCCAGC TGCTGTGCTC GCTGGTCGCG
CCGCGCCGCG GTGAAATGGT CGTCGATTTC TGCGCGGGCG CGGGCGGCAA GACGCTCGCA
CTCGGCGCGA TGATGCGCTC GACCGGGCGC CTCTATGCGT TCGACATCTC GGAGAAGCGT
CTCGCGAAGC TGAAGCCGCG CCTCGCGCGC AGCGGGCTGT CGAACGTGAA CCCGGTGCTG
ATCGACAGCG AGCACGACGC GAAGATCAAA CGGCTCGCCG GCAAGATCGA CCGCGTGCTG
GTCGATGCGC CGTGCAGCGG CCTCGGCACG CTGCGCCGCA ATCCGGACCT GAAGTGGCGC
CAGACGCGCA CGGCGATCGA CGAGCTGACG CCGAAGCAGG CGTCGATCCT CGCGAGCGCC
GCGCGGCTCG TGAAGAAGGG CGGCCGGCTC GTCTACGCGA CCTGCAGCGT GCTCGACGCC
GAGAACGAGC GCATCGTCGA ACAGTTCCTG GCCGATCATC CGGAGTTCAC GCTGGTGCCG
GCGCAGCAGG TGCTGGCCGA CCAGCGCATC GAGCTCGAGA CGGGCGACTA CCTGTCGCTG
TGGCCGCACC GTCACGCGAC CGACGGCTTC TTCGCCGCGG TGCTCGAGCG CCGCGCCGCG
CAGTAA
 
Protein sequence
MKLHGFLIGQ TETLLAEVLK FAGPADATTS RFFRAHPKLG HAERGVIAEA VFAVLRRKME 
FSHLAESGTG TPARRLTLLG LMQTMGRNAL KPFLSDTESA WLEHVSKIDP ASLPVRIRTN
LPDWIHQALS ERFDAEELAQ LAAALNYPAP LDLRANAQKA TRDQVIEALR VSGIEAGATP
FAPFGVRVVG KPALTRLKLF EEGAIEVQDE GSQLLCSLVA PRRGEMVVDF CAGAGGKTLA
LGAMMRSTGR LYAFDISEKR LAKLKPRLAR SGLSNVNPVL IDSEHDAKIK RLAGKIDRVL
VDAPCSGLGT LRRNPDLKWR QTRTAIDELT PKQASILASA ARLVKKGGRL VYATCSVLDA
ENERIVEQFL ADHPEFTLVP AQQVLADQRI ELETGDYLSL WPHRHATDGF FAAVLERRAA
Q