Gene Bcen_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1884 
Symbol 
ID4093087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2080374 
End bp2081150 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID638015165 
ProductABC transporter related 
Protein accessionYP_621760 
Protein GI107023433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA AGCAAATCCG ACTGTCCGTC TCGGGCGTGA ACAAGCGCTT CGGCGGGCTG 
CAGGCGCTGT CCGACGTCGG CCTGCAGATC CGCGAAGGCG AGATCTACGG TCTGATCGGC
CCGAACGGCG CCGGCAAGAC GACGTTCTTC AACGTGATCA CGGGCCTCTA TACGCCCGAC
TCCGGCGACT TCAAGCTGGA CGGCACGAAC TACACGCCGA CGGCCGTGCA CCAGGTGGCC
AAGGCCGGCA TCGCGCGCAC GTTCCAGAAC ATCCGCCTGT TCGGCGGGAT GACGGCGCTC
GAGAACGTGA TGGTGGGCCG CCACGTGCGC ACCAAGCACG GGCTGCTCGG CGCGGTGTTC
CAGACGCCGG CCGAACGCCA GGAAGAGCGC GAGATCAAGG AGCGCGCGAT CGAGCTGCTC
GAATACGTCG GCGTGCTGCA GTACGCCGAC TACACGTCGC GGAACCTGTC GTACGGTCAC
CAGCGCCGGC TGGAAATCGC CCGGGCCCTC GCGACCGACC CGAAGCTGCT CGCGCTCGAC
GAGCCGGCAG CCGGGATGAA CGCGACCGAG AAGGTCGAAC TCACGCGCCT GCTCGACAAG
ATCCGCTCGG ACGGCCGCAC GATTCTCCTG ATTGAGCACG ACGTGAAGCT CGTGATGGGG
CTGTGCAACC GGATGACGGT GCTCGATTAC GGCAAGGTGA TCGCCGAAGG TCTGCCGCAG
GACGTGCAGA AGAATCCGAA GGTGATTGAG GCATATCTCG GCGCAGGGGT GCACTGA
 
Protein sequence
MSDKQIRLSV SGVNKRFGGL QALSDVGLQI REGEIYGLIG PNGAGKTTFF NVITGLYTPD 
SGDFKLDGTN YTPTAVHQVA KAGIARTFQN IRLFGGMTAL ENVMVGRHVR TKHGLLGAVF
QTPAERQEER EIKERAIELL EYVGVLQYAD YTSRNLSYGH QRRLEIARAL ATDPKLLALD
EPAAGMNATE KVELTRLLDK IRSDGRTILL IEHDVKLVMG LCNRMTVLDY GKVIAEGLPQ
DVQKNPKVIE AYLGAGVH