Gene Bcen_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1883 
Symbol 
ID4093086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2079658 
End bp2080374 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID638015164 
ProductABC transporter related 
Protein accessionYP_621759 
Protein GI107023432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGG CAATGTTGAA AATCAAGGGC TTGCAGGTCA ACTACGGCGG CATCCAGGCC 
GTCAAGGGCG TTGACATGGA AGTCCGTCAG GGCGAGCTCG TGACGCTGAT CGGTGCGAAC
GGCGCCGGCA AGACCACGAC GATGAAGGCG ATCACCGGGC TGAAGCCGTA TTCGGCCGGC
GACATCGAGT ACGAAGGCAA GTCGATCAAG GGCATCCCGT CGCACGAGCT GCTCAAGCGC
GGCCTCGCGA TGGTGCCGGA AGGCCGCGGG ATCTTCGCGC GCATGTCGAT CATCGAGAAC
ATGCAGATGG GCGCGTACCT GCGCAACGAC AACGAGCAGA TCAAGAAGGA CGTCGACCGG
ATGTTCGGCT TCTTCCCGCG CCTGAAGGAA CGGGCGACGC AGCTCGCGGG CACGCTGTCG
GGCGGCGAGC AGCAGATGCT GGCGATGTCG CGCGCGATCC TGTCCAAGCC GAAGCTGCTG
CTGCTCGACG AGCCGTCGAT GGGGCTGTCG CCGATCATGG TCGAGAAGAT CTTCGAAGTG
GTTCGGGAGA TCTCGAAGGA GGGCGTCACG GTGCTGCTGG TCGAGCAGAA CGCACGCCTC
GCGCTGCAGG CGGCCGACCG CGGCTACGTG ATGGATTCGG GCACGGTCAC GATGGAAGGC
GACGCGAAGC AGATGCTCGA CGATCCGAAG GTGCGCGCCG CGTATCTGGG CGAGTAA
 
Protein sequence
MAAAMLKIKG LQVNYGGIQA VKGVDMEVRQ GELVTLIGAN GAGKTTTMKA ITGLKPYSAG 
DIEYEGKSIK GIPSHELLKR GLAMVPEGRG IFARMSIIEN MQMGAYLRND NEQIKKDVDR
MFGFFPRLKE RATQLAGTLS GGEQQMLAMS RAILSKPKLL LLDEPSMGLS PIMVEKIFEV
VREISKEGVT VLLVEQNARL ALQAADRGYV MDSGTVTMEG DAKQMLDDPK VRAAYLGE