Gene Bcen_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1878 
Symbol 
ID4093081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2074615 
End bp2075652 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content74% 
IMG OID638015159 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_621754 
Protein GI107023427 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.480362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCGA CACGAATCCT GCGCCGGCCG CGCGTACTGA TCGTCGGCTG CGGCGACGTC 
GGCATGCGCT GCGTCGCGCA ATGGCGTAAC GCGCGCCCCG ACCTGCGTAT CCTCGCGCTG
ACGAGCCATC CGGCTCGCCG CGACGAACTG CGCGCCGCGG GCGCGACGCC GATCGTCGGC
GACCTCGATC GCCGGGCGGC GCTCGGCCGT CTCGCGGGCC TCGCCCGCAC GATCCTGCAT
CTCGCGCCGC CGCCATCCGA CGGCCGTGAC GACCGGCGCA CGCGTGCGCT GATCGCCGCA
ACGTCCATGC CCGCGCGTCG GCCGGCGGCA CCGCCGGCCC CGGCGGTCGG CCGGCTCCGA
ACGCTGCGCA CCGCGGCGCG ACAGGCCGGC GCGCCCGTTC GGGCAGCGCG TATTGTACCC
GAGGGCCTTC GCGCGCCGAC GCTCGTCTAT GCCAGTACGA CGGGCGTCTA CGGCGACTGC
GGCGGCGCGC GCATCGACGA AACGCACCCG CTGCGCCCCG CGAATCCGCG CGCGTTCCGG
CGCGTGTCGG CCGAGCGGCA ACTGCGTGCG GCGACGGTGC GCGGCGTGCT GTCCGCACGC
ATCGTGCGCA TCCCCGGCAT CTACGCGGCG AACCGCCTGC CGGTCGCGCG GCTCGAGCGC
GGCACGCCGG CGCTCGAGCC GGCCGACGAC GTCTACACGA ACCACATCCA TGCGGACGAT
CTCGCGGCGA TCCTGCGCCG GGCGGCCGAG CAGGGCAAGC CGGCGCGCGT CGTGCACGCG
TCGGACGACA CCGAATGGCG GATGGGAGAG TATTTCGACC GGGTCGCGCA GGTGCTCGGC
CTGCCGAAGC CGCCGCGCGT GAGCCGCGCG GACGCCGAGC GCCTGCTCGA GCCGACGCTG
CTGTCGTTCA TGCGCGAGTC GCGGCGCCTG TCCAACACAC GGCTCAAGGC CGAATTGTGC
GTGACGTTGC GCTATCCGAC CGTAGACGAT TTCCTTCAAA CGCTCGCGCC GGCCAGCGCG
TCAGGTGAGC GCCGGTAA
 
Protein sequence
MIATRILRRP RVLIVGCGDV GMRCVAQWRN ARPDLRILAL TSHPARRDEL RAAGATPIVG 
DLDRRAALGR LAGLARTILH LAPPPSDGRD DRRTRALIAA TSMPARRPAA PPAPAVGRLR
TLRTAARQAG APVRAARIVP EGLRAPTLVY ASTTGVYGDC GGARIDETHP LRPANPRAFR
RVSAERQLRA ATVRGVLSAR IVRIPGIYAA NRLPVARLER GTPALEPADD VYTNHIHADD
LAAILRRAAE QGKPARVVHA SDDTEWRMGE YFDRVAQVLG LPKPPRVSRA DAERLLEPTL
LSFMRESRRL SNTRLKAELC VTLRYPTVDD FLQTLAPASA SGERR