Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1876 |
Symbol | |
ID | 4093079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2073621 |
End bp | 2074337 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015157 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_621752 |
Protein GI | 107023425 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.471892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG AAAGCATTCT CTACACCCAG GGCTTCGGCT CGCGCCGCCA GTGCCGCGGT CTGATCGAAG CGGGCCGCGT CGCCGTCGCG GGCGCCGCCG CGACCGACCC GGACGCCACC TTCGACACCG ACGGCCTCGT GTTCTCGGTC GACGATACGG CGTGGCCGTT CCATGCACGC GCGTACCTCG CACTCAACAA GCCGGCGGGC TACGAGTGTT CGCGCGATCC GCAGCACCAT GCGAGCGTGT TCAGCCTGCT GCCCGCGCCG CTCGTCGCGC GCGGCGTGCA ATGCGTGGGC CGGCTCGACC AGGACACGAC CGGCCTGCTG CTGCTGTCCG ACGACGGCCA GTTCGTGCAC GCGTACACGT CGCCGAAGCG CAAGGTGCCG AAGACCTACG TCGCGACCGT GCGCCACCCG CTCGACGACA CGCAACTGCA CGCGCTGCGC ACCGGCGTGC AACTGCATGG CGAACCGAAG CCGATCGCGG CCGTCGCCGC CGACGCCCGC GACACGCATG CACTCGCGCT GACCGTGCTC GAAGGCAAGT ACCACCAGGT CAAGCGGATG GTCGCCGCGG CGAGTAACCG CGTCGAATTG CTGCACCGCG AAAGCATCGG CGGGTTCGCG CTGCCGGCCG ACCTCGCGCC CGGCGCATGG CGATGGCTCG ACGAAGCCGA CCTTGCCGCG CTGCGCAATT CCGTCAAAAC CCTGTAA
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Protein sequence | MDLESILYTQ GFGSRRQCRG LIEAGRVAVA GAAATDPDAT FDTDGLVFSV DDTAWPFHAR AYLALNKPAG YECSRDPQHH ASVFSLLPAP LVARGVQCVG RLDQDTTGLL LLSDDGQFVH AYTSPKRKVP KTYVATVRHP LDDTQLHALR TGVQLHGEPK PIAAVAADAR DTHALALTVL EGKYHQVKRM VAAASNRVEL LHRESIGGFA LPADLAPGAW RWLDEADLAA LRNSVKTL
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