Gene Bcen_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1876 
Symbol 
ID4093079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2073621 
End bp2074337 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID638015157 
Productpseudouridine synthase, Rsu 
Protein accessionYP_621752 
Protein GI107023425 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.471892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG AAAGCATTCT CTACACCCAG GGCTTCGGCT CGCGCCGCCA GTGCCGCGGT 
CTGATCGAAG CGGGCCGCGT CGCCGTCGCG GGCGCCGCCG CGACCGACCC GGACGCCACC
TTCGACACCG ACGGCCTCGT GTTCTCGGTC GACGATACGG CGTGGCCGTT CCATGCACGC
GCGTACCTCG CACTCAACAA GCCGGCGGGC TACGAGTGTT CGCGCGATCC GCAGCACCAT
GCGAGCGTGT TCAGCCTGCT GCCCGCGCCG CTCGTCGCGC GCGGCGTGCA ATGCGTGGGC
CGGCTCGACC AGGACACGAC CGGCCTGCTG CTGCTGTCCG ACGACGGCCA GTTCGTGCAC
GCGTACACGT CGCCGAAGCG CAAGGTGCCG AAGACCTACG TCGCGACCGT GCGCCACCCG
CTCGACGACA CGCAACTGCA CGCGCTGCGC ACCGGCGTGC AACTGCATGG CGAACCGAAG
CCGATCGCGG CCGTCGCCGC CGACGCCCGC GACACGCATG CACTCGCGCT GACCGTGCTC
GAAGGCAAGT ACCACCAGGT CAAGCGGATG GTCGCCGCGG CGAGTAACCG CGTCGAATTG
CTGCACCGCG AAAGCATCGG CGGGTTCGCG CTGCCGGCCG ACCTCGCGCC CGGCGCATGG
CGATGGCTCG ACGAAGCCGA CCTTGCCGCG CTGCGCAATT CCGTCAAAAC CCTGTAA
 
Protein sequence
MDLESILYTQ GFGSRRQCRG LIEAGRVAVA GAAATDPDAT FDTDGLVFSV DDTAWPFHAR 
AYLALNKPAG YECSRDPQHH ASVFSLLPAP LVARGVQCVG RLDQDTTGLL LLSDDGQFVH
AYTSPKRKVP KTYVATVRHP LDDTQLHALR TGVQLHGEPK PIAAVAADAR DTHALALTVL
EGKYHQVKRM VAAASNRVEL LHRESIGGFA LPADLAPGAW RWLDEADLAA LRNSVKTL