| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1872 |
|---|
| Symbol | |
|---|
| ID | 4093075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2070519 |
|---|
| End bp | 2071568 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638015153 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_621748 |
|---|
| Protein GI | 107023421 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.841417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAATG GACGGGCGCG CGACCACGAG GCCGCGCGCC CGTTTTCTCT GTGCCGCCGA
AGCCGGCCGC GATGCGCGGC GGCCGGCGGC GACCGTCGTT CGAACCCGGG TTTCCCGCCG
ATGGACAAGC TGGATCAGGT CAGGATCTTC CTGCAGGTTG CCGAGATGGG CAGCTTCATC
AAGGCCGCGC ATGCGCTCGA CGTGCCGCGC GCGACCGTGT CGGCGGCCGT CCAGCAGCTC
GAGACGGCGC TCGGCACGCG TCTGTTGCAC CGCACGACCC GCCAGGTGCA GCTGACCGCC
GACGGCGCGC TGCTGCTCGA GCGCGGCCGG CGCCTGCTCG CGGAGGCCGA CGAACTCGAC
CGCCTGTTTC GGCGCCGCGA CCGTGACGTG GTCGGGCGGC TGAACGTCGA CGTGCCGAGC
CGGATCGCGC GCCGCGTCGT GGCGCCCGCG CTGCCGTCGC TGTTTCGCCG CCACCCGAAG
CTGCAACTGT CGCTCGGCTC GACGGACCGC TCGATCGACC TCGTGCAGGA GGGCGTCGAT
TGCGCGATCC GCGTTGGGCG GCTCGCGGAC AGCAGCCTCG TCGTGCGGCC GCTCGGGCAG
TTCACGCTGA TCAACTGCGC GAGCCCCGAC TATCTGCGCG AGTGCGGCGT ACCCGAGCAT
CCGGACGCGC TCGCGCACGG GCACTGGGCG ATCGGCTATG CGTCGCCGAC GACCGGGCGC
GAGCTCGGCT GGGAATACTG CGCGGACGGG CAGCGGCACA CGCTGACACT GCCGAGCCGC
GTGATCGTCA ACAACGCCGA AACCTATATC GCCGGCTGCA TCGCCGGAAT GGGCTTGATC
CAGATTCCGC GCTTCGACGT CGAGCATCTG CTCGCAAGCG GCGCGCTCGT CGACGTGATG
CCCGGCCACC GCGCCGAGCC GATGGACGTA TCGGCCGTGT ATCCGCACCG CCGGCATCGC
TCGCGCCGGC TCAACGCGTT CATCGAGTGG TTCGGCGCGT TGATGGCGGA TGCGTTGAAC
GACGCGGGCG CGCGCGGCAG CGGCGACTGA
|
|---|
| Protein sequence | MDNGRARDHE AARPFSLCRR SRPRCAAAGG DRRSNPGFPP MDKLDQVRIF LQVAEMGSFI
KAAHALDVPR ATVSAAVQQL ETALGTRLLH RTTRQVQLTA DGALLLERGR RLLAEADELD
RLFRRRDRDV VGRLNVDVPS RIARRVVAPA LPSLFRRHPK LQLSLGSTDR SIDLVQEGVD
CAIRVGRLAD SSLVVRPLGQ FTLINCASPD YLRECGVPEH PDALAHGHWA IGYASPTTGR
ELGWEYCADG QRHTLTLPSR VIVNNAETYI AGCIAGMGLI QIPRFDVEHL LASGALVDVM
PGHRAEPMDV SAVYPHRRHR SRRLNAFIEW FGALMADALN DAGARGSGD
|
|---|
| |