Gene Bcen_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1869 
Symbol 
ID4093072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2067605 
End bp2068504 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID638015150 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_621745 
Protein GI107023418 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAG TCGTCCTCGT CACCGGCGCG TCCAGCGGCT TCGGCTTGCT GACGGTCCAG 
GCGCTCGCGC GCGCCGGTCA CACGGTCTAT GCATCGATGC GCGAGCGCGC CGGGCGCAAC
GCGCCGCGCG CCGCCGCCGT CGCGGCCTAT GCGCAGGAAC ACGGCGTCGA CCTGCGCAGC
CTCGAACTCG ACGTCGGCGA CGACGCATCG GTCGACGCCG CCATCGAGCG CGTGATCACC
GACAACGGCC GTCTGGACGT CGTCGTCCAC AACGCCGGCC ACATGGTGTT CGGGCCGGCC
GAAGCCTTCA CGCCGGAGCA GCTTGCGCAG CTCTACGACG TCAACGTCGT GTCGACCCAG
CGCGTGAACC GCGCGGCGCT GCCGCACCTG CGCCGCCAGG GCCGCGGCCT GCTCGTGTGG
GTGTCGTCCT CGTCGGCGCG CGGCGGCACC CCGCCGTTCC TCGCCCCCTA CTTCGCCGCG
AAAGCCGCGA TGGACTCGCT CGCGGTGTCC TACGCCGCCG AACTCGCCCG CTGGGGCATC
GAAACGTCGA TCGTCGTGCC GGGCGCGTTC ACCCGAGGCA CGAATCACTT CCTCCATGCG
GGCAAGCCGG CCGATACCGC CGTGCAGGCT GCGTACGACA GCGGGCCGTA CGCGGGCGTC
GCCGATCAGG CGTTGACGGG CCTCGCCGCG CTCGAACCGG CGGACGCCGA CGCCGGCGCC
GTCGCCACGG CGATTGCCGA GCTCGTCGCG GCGCCGGCCG GCAAGCGCCC CTACCGCGTG
TTCGTCGACC CGTCGCAGGA CGGCGCCGAG GAAGTGTTCC GTGTCGGCGA TCGCATCCGC
CGCGAGATGT TCCGGAACAT CGGGCTCGCC GATCTGCTCG CGCCGCGTGT CGACGGCTGA
 
Protein sequence
MKEVVLVTGA SSGFGLLTVQ ALARAGHTVY ASMRERAGRN APRAAAVAAY AQEHGVDLRS 
LELDVGDDAS VDAAIERVIT DNGRLDVVVH NAGHMVFGPA EAFTPEQLAQ LYDVNVVSTQ
RVNRAALPHL RRQGRGLLVW VSSSSARGGT PPFLAPYFAA KAAMDSLAVS YAAELARWGI
ETSIVVPGAF TRGTNHFLHA GKPADTAVQA AYDSGPYAGV ADQALTGLAA LEPADADAGA
VATAIAELVA APAGKRPYRV FVDPSQDGAE EVFRVGDRIR REMFRNIGLA DLLAPRVDG