Gene Bcen_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1868 
Symbol 
ID4093071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2066824 
End bp2067561 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID638015149 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_621744 
Protein GI107023417 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAT CGGAACAGGT CGCCGTCGTC ACGGGTTCGT CGCGCGGCAT CGGCGCGGAA 
ATCGCCCGCC AACTCGCCCG GGACGGCTTC CGGGTCGTCG TCAACTATGC CGGGAGCGCC
GGCCCGGCCC GCGAAGTGGT CGACGCGATC GTCGCCGACG GCGGCCATGC GATCGCGGTG
CAGGCGAACG TCGCCGACCC GGCGGCCGTG GCCGCGCTGT TCGACGCCGC GCAACACGCA
TTCGGCGGTC TGGATGTGGT GGTCAATTCC GCGGGCGTGA TGAAGCTCGC GACCATCGCC
GACTGCGACG ATGCGCTGTT CGACGAAACG CTCGCCATCA ACGTGAAAGG CACCTTCAAC
GTCTGCCGCG AAGCGGCCAG GCGGGTGCGC GACGGCGGAT GCATCATCAA CCTGTCGACC
AGCGTGATCG GCATGCGCAT GCCGACTTAC GGCGTGTACG TCGCCAGCAA GGCGGCGGTC
GAAAGCCTCA CGCAGGTGCT TGCGCAGGAA ATGCGCGGGC GCGGCATCCG CGTGAATGCC
GTCGCGCCCG GGCCGGTCGC GACCGAGCTG TTCCTGCAGG GCAAGAGCCC GGAACTCGTC
GAGCGGCTCG CGAAGCTGAA CCCGCTCGAG CGGCTCGGCC AGCCCGACGA CATCGCGCGC
GTCGTCGCGT TCCTCGCCGG CCCGAACGGC GCGTGGATCA ACGGCCAGAT CCTGCGCGCC
AACGGCGGCA TGTGCTGA
 
Protein sequence
MSTSEQVAVV TGSSRGIGAE IARQLARDGF RVVVNYAGSA GPAREVVDAI VADGGHAIAV 
QANVADPAAV AALFDAAQHA FGGLDVVVNS AGVMKLATIA DCDDALFDET LAINVKGTFN
VCREAARRVR DGGCIINLST SVIGMRMPTY GVYVASKAAV ESLTQVLAQE MRGRGIRVNA
VAPGPVATEL FLQGKSPELV ERLAKLNPLE RLGQPDDIAR VVAFLAGPNG AWINGQILRA
NGGMC