| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1857 |
|---|
| Symbol | |
|---|
| ID | 4091076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2055031 |
|---|
| End bp | 2056179 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638015137 |
|---|
| Product | permease YjgP/YjgQ |
|---|
| Protein accession | YP_621733 |
|---|
| Protein GI | 107023406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.693669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTCT ATGAAAAATA CTTCGCGCGG CAGATCTACA TCACGTTCGT CTTCATCCTG
TTCGCGTTCT CGGGTCTGTT CTTCTTCTTC GACCTGATCA GCGAGCTGAA CTCGGTCGGG
CACGGCAACT ACAAGTTCGG TTACGCGGTG CTGCGCGTCG CGCTGCAGAC GCCGTCGCGC
TTCTACGAGA TCATCCCGGT CGCCGCGCTG ATCAGCGCGA TCTACGTGTT CGCGCAGATG
GCCGCGAACT CGGAATTCAC GATCTTCCGC GTGTCGGGCC TCGCGACCAA CCAGGCGCTG
CGCTCGCTGC TGAAGATCGG CGTGCCGCTC GTGATCGTCA CCTACCTGAT CGGCGAATTC
GTCGGCCCGT ACGCCGACCA GTTGTCCGAA CGCGTGCGGC TGCAGGCGCT CGGCGCCTCG
GTGTCGTCGA ACTTCCAGTC CGGTGTGTGG GTCAAGGACA CGCTCGCCGC CCGCGAGAAC
GGCGAGCAGG TCACGCGCTT CGTCAACGTC GGCAGCCTGT CGCCCGACTC GACGATCAGC
AACGTGCGCA TCTACGAATT CGACTCGAAA TTCCAGCTGC AGAACGTGCG GATCGCGCAG
ACGGGCCGCT ACGAGCCGCC CGGCCACTGG CTGCTGAAGG GCGTCACCGA GACGGAGCTG
ACGCCGATCA AGCCGATCAC CGGCCAGCCG GCCGATGCGC TGAACCCCGT GTACCGGTCG
CAGCAGGTGT CGCTGCCCGA ATACCGGCTG CACTCCGACC TGACGCCGCA GATCCTGTCG
GTGCTGCTCG TGTCGCCGGA GCGCATGTCG ATCATCAACC TGTTCCGCTA CATCCAGCAC
TTGCGCGAGA ACCAGCAGGA CACGCAGCGC TACGACATCG CGCTGTGGCG CAAGCTGCTG
TATCCGTTCG CGGTGTTCGT GATGCTCGTG TTGTCGCTGC CGTTCGCGTA CCTGCACACG
CGGGCGGGCG TGGTCGGCGT GAAGGTGTTC GGCGGCATCA TGCTCGGCAT GAGCTTCCAG
CTGCTCAACA CGCTGTTCTC GCACATCGGC ACGCTGAATA CGTGGCCCGC GCCGCTCACC
GCCGCGACGC CGGGCCTCAT CTATCTCGCG CTCGGCCTGT TCGCGCTCAA GTGGGTCGAC
CGGCACTGA
|
|---|
| Protein sequence | MRLYEKYFAR QIYITFVFIL FAFSGLFFFF DLISELNSVG HGNYKFGYAV LRVALQTPSR
FYEIIPVAAL ISAIYVFAQM AANSEFTIFR VSGLATNQAL RSLLKIGVPL VIVTYLIGEF
VGPYADQLSE RVRLQALGAS VSSNFQSGVW VKDTLAAREN GEQVTRFVNV GSLSPDSTIS
NVRIYEFDSK FQLQNVRIAQ TGRYEPPGHW LLKGVTETEL TPIKPITGQP ADALNPVYRS
QQVSLPEYRL HSDLTPQILS VLLVSPERMS IINLFRYIQH LRENQQDTQR YDIALWRKLL
YPFAVFVMLV LSLPFAYLHT RAGVVGVKVF GGIMLGMSFQ LLNTLFSHIG TLNTWPAPLT
AATPGLIYLA LGLFALKWVD RH
|
|---|
| |