Gene Bcen_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1839 
Symbol 
ID4091057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp2038380 
End bp2039297 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content71% 
IMG OID638015119 
Productperiplasmic binding protein 
Protein accessionYP_621715 
Protein GI107023388 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.052226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCC CCATGTTCCG CCGGCTCGCG CCGGCCGCGC TGCTGGCCGC GCTCGCTCAC 
GCACCGCTCG TCCACGCCGA CGTCACGACC CGCGACGACG CCGGCAACAC GGTCACGTTA 
CCCGCGCCTG CCCAGCGCGT AATCAGCCTC GCGCCGCACG CGACCGAGCT CGTCTATGCG 
GCCGGCGGCG GCGCGAAGCT CGTCGGCACC GTCACGTACA GCGACTATCC GGCCGCCGCG 
CAAGCGGTGC CACGCGTCGG CGACAACAAG GCGCTCGATC TCGAACGCAT CGCCGCGCTG 
AAGCCCGACC TGATCGTCGT GTGGCGGCAC GGCAACGCCG AGCGGCAGAC CGACGCGCTG 
CGCGCGCTGC ACATTCCGCT GTTCTTCAGC GAACCGAAGC ATCTCGACGA CGTGTCGTCG 
TCGTTGCGCC GGCTCGGCAC GCTGCTCGGC ACGCAACCGA CTGCCGATGC CGCCGCGGCC 
GCCTTTACCC GAGACATCGC GACACTGCGC GCACGCTACG CGGCACGCCC GCCCGTCACG 
ATGTTCTTCC AGGTGTGGGA CCGCCCGCTG ACGACGCTCA ACGGCACGCA TCTGATCAAC 
GAAGTGTTCG AACTCTGCGG CGGCCGCAAC GTATTCGCGT CGCTCAAGCC GCTCGCGCCG 
ACCGTGACCG ACGAGGCCGT GCTCGCGGCG AATCCGGAAG CGATCGTGAC GACGAGTGCC 
GGCGCGACCC GTTCGAACGA ACCGCTGCCG AGCCTCGCGC GCTGGCGTGC GTGGCCCGCG 
CTGACGGCCG TGGCGCGCAA CAACCTGTTC GCGATCGACG GCGATCTGCT GACGCGGCCA 
TCGCCGCGGA TCGCGCAGGG TGCGGCCGCG CTGTGCGAGG ATCTGGATGC CGCGCGTGCG 
CGGCGGCCGG TGCGCTGA
 
Protein sequence
MSAPMFRRLA PAALLAALAH APLVHADVTT RDDAGNTVTL PAPAQRVISL APHATELVYA 
AGGGAKLVGT VTYSDYPAAA QAVPRVGDNK ALDLERIAAL KPDLIVVWRH GNAERQTDAL 
RALHIPLFFS EPKHLDDVSS SLRRLGTLLG TQPTADAAAA AFTRDIATLR ARYAARPPVT 
MFFQVWDRPL TTLNGTHLIN EVFELCGGRN VFASLKPLAP TVTDEAVLAA NPEAIVTTSA 
GATRSNEPLP SLARWRAWPA LTAVARNNLF AIDGDLLTRP SPRIAQGAAA LCEDLDAARA 
RRPVR