Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1828 |
Symbol | |
ID | 4091046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2027921 |
End bp | 2029735 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638015108 |
Product | surface antigen (D15) |
Protein accession | YP_621704 |
Protein GI | 107023377 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGGGGC AGTCGAACCA GCAAGCACAC ACGGCGCATC ACGCGGGCCC GCGCGCGGCC CGCGATCGCG CCGGCGCCGC GGCCCGCGTC GCGCGGGCGG CCCTCGCGGG TTGCCTGGCC GCGTGTTTCG CGCTGCCGGC CCATGCGAAA TACGACGTCG ACATCGACGC GCCGCGCTCG ATCCGCAAGC TCCTGAAGAC CCATCTCGAT ATTGCCCGCT TCGCGAAGCG TGACGACATC AGCGACGACC AGTTCGACTT CCTCGTGACC GCCACGCCGC AGCAGGTGCG CGATTTGACC GCGACGGCCG GCTATTTCTC GCCGGTCGTG CGTACCGACG TGCGCACCCG CGACGGCAAG CGCGACGTGC ACATCGCGGT CGATCCGGGC AAGCAGACCG TCGTGTCGAC GGTCGACCTG ACGTTCAAGG GGCCGGTCGA GACCGAGGAC CCGAAGCAGG AAACCGCGAC CCGTTTCGCG TTCTCGATGA AGCCGGGCGA TCCGTTCACG CAATCCGACT GGGACGACGC GAAGGGCGCG GCGCTCCGGC AACTGCAGTC GCGCCGCTAT CTCGGCGCGA AGATCGTGTC GTCCGAGGCG CGCATCGATC CGCGCACGCA GCGTGCGACG CTCGCGGTCG CGTTCGACAG CGGCCCGACG TTCACGATCG GCAAGGTTGA TGTCGACGGC GTGCGCCGTT ATCCGGAAAA GATCGTCACG AACGTCAATC CGCTGTCGGA AGGCGAGATC TACGACGTGC AGCGGATCGC CGAATTGCAG CGCCAGTTGC AGAACACGCC GTACTACGCG AGCGTCGCGA TCGACGTCGG CGACGATACG TCGAAGCCCG AGCGCACGCC CGTGCACGTG AAGGTCAGCG AGTTTCCGTA CAACAACATC CGCGGCGGCG TCGGCTTCGC CACCGATACC GGGCCGCACG TGCAGGGTTC CTATACGTAT CTCGACACGT TCGGCGCCGC GTGGCCGCTG ACCGTGTCGG GCCGGCTCGA CCAGATCCAG CAGTACGGGC AGGTCCAGCT GTCGATGCCG CCGGGCGAGA AGGGCTGGAC CAACAGCGTG CTCGCGTCGT ACACGAACAC CAACGTGTCG GACACGCGCA TCTACAGCGC GCGGGTCGGC GTGCAGCGCA CGCGCACCGG CCAGTTCATC GACTATGCGT ATTCGCTGAT GTACTACCAG GATCGGCTCG ACCAGAACGG CGCGGGGCCG ACCACGAGCC GCGCGCTGGT GCCGCAGTGG GCGTGGACCC GCCGCAACGT CGACGATCCG CTGTTCCCGC GCTCGGGCAA CCTGATTCAT GCGGAGGCCG GCTTCGCGGT CAAGGGCGTG CTGGCCGACG AGAGCTTCAT TCGCGGCTAC GCGCGCGGCC AGCAGTATTT GCCGATCGGC AAGCGCGACC TGTTCGTGTT CCGCGCGGAA CTCGGCGGCG TGTTTACGAG CGGCAGCTCG ACCGGCGTGC CGGCGTCGCT GCTGTTCCGC GCCGGCGGCT CGAACTCGGT GCGCGGCTAC GGTTACCAGA GCATCGGCAA CAGCGTCGAC GGCTCCGTTT TGCCGACCAA GTACCTGATG ACGGGGACGG CCGAATACCA GCACTGGTTC AACCGCGACT GGGGCGCCGC GACGTTCTTC GACATCGGCA CCGCGACCGA TGCATGGGGC GAGCGCGTGT TTTACCCGGG CGTGGGCGTC GGTGCACGCT GGCGCAGCCC GGTCGGCCCG ATCAACGTCG ACGTCGCGTA CGGCTTGCGC AACCACAGCG TGCGCCCGTA CCTGACGCTC GGCATCGCTT TCTGA
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Protein sequence | MAGQSNQQAH TAHHAGPRAA RDRAGAAARV ARAALAGCLA ACFALPAHAK YDVDIDAPRS IRKLLKTHLD IARFAKRDDI SDDQFDFLVT ATPQQVRDLT ATAGYFSPVV RTDVRTRDGK RDVHIAVDPG KQTVVSTVDL TFKGPVETED PKQETATRFA FSMKPGDPFT QSDWDDAKGA ALRQLQSRRY LGAKIVSSEA RIDPRTQRAT LAVAFDSGPT FTIGKVDVDG VRRYPEKIVT NVNPLSEGEI YDVQRIAELQ RQLQNTPYYA SVAIDVGDDT SKPERTPVHV KVSEFPYNNI RGGVGFATDT GPHVQGSYTY LDTFGAAWPL TVSGRLDQIQ QYGQVQLSMP PGEKGWTNSV LASYTNTNVS DTRIYSARVG VQRTRTGQFI DYAYSLMYYQ DRLDQNGAGP TTSRALVPQW AWTRRNVDDP LFPRSGNLIH AEAGFAVKGV LADESFIRGY ARGQQYLPIG KRDLFVFRAE LGGVFTSGSS TGVPASLLFR AGGSNSVRGY GYQSIGNSVD GSVLPTKYLM TGTAEYQHWF NRDWGAATFF DIGTATDAWG ERVFYPGVGV GARWRSPVGP INVDVAYGLR NHSVRPYLTL GIAF
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