Gene Bcen_1825 details

Gene Information

• Locus tag: Bcen_1825
• ID: 4093370
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 2020559
• End bp: 2021206
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638015105
• Product: OmpA/MotB
• Protein accession: YP_621701
• Protein GI: 107023374
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000764276
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATGA AAATCGCGAC TCGCCTGTCC GTATTCGCAC TCGCCGGCGC ACTGCTGGCA 
GGCTGCGCCA CGCAGCAAGG CAACAATACG GCCGTCGGTA CCGGCACGGG CGCGGCGCTG 
GGCGCGGGGA TCGGGGCACT GGCCGGTGGC GGCAAGGGCG CGGCGATCGG CGCGGGCGTC 
GGCGCACTGG TCGGTGGCGT GACGGGTTAC AACTGGCAGG CGATCAAGAA CAAGCTCGCG 
CCGTCGGCAG CGCAGACGGG CACGCAGGTC ACCGAGCAGC CGGACGGCTC GCTGAAGCTG 
AACGTGCCGA GCTCGGTCAC GTTCGCGACG AACCAGTACG CGATCACGCC GGCGTTCACG 
CCGCTGCTGA ACGACCTCGC GACGACGCTG AACCAGAACC CGCAAGTCAC GGCGTCGATC 
GTCGGCTACA CGGACAGCAC GGGCTCGCAG CAGCTGAACC AGACGCTGTC GCAGAACCGC 
GCGCAAAGCG TCGTGAACGC GCTCGTGCAG CGCGGCGTGA ATGGCGGCCG TCTGTCGGCG 
CAAGGCATGG GCCCGTCGAA CCCGATCGCG GACAACGCGA CCGAAGCCGG CCGCGCACAG 
AACCGCCGCG TCGAGATCTA CCTGCGCGCG CCGCAACAGC ATCAGTAA 

 

Protein sequence

MNMKIATRLS VFALAGALLA GCATQQGNNT AVGTGTGAAL GAGIGALAGG GKGAAIGAGV 
GALVGGVTGY NWQAIKNKLA PSAAQTGTQV TEQPDGSLKL NVPSSVTFAT NQYAITPAFT 
PLLNDLATTL NQNPQVTASI VGYTDSTGSQ QLNQTLSQNR AQSVVNALVQ RGVNGGRLSA 
QGMGPSNPIA DNATEAGRAQ NRRVEIYLRA PQQHQ