Gene Bcen_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1817 
Symbol 
ID4093362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2011037 
End bp2012002 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID638015097 
Producttransposase IS116/IS110/IS902 
Protein accessionYP_621693 
Protein GI107023366 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTC CTTCTGCCGT AACGGTCGGC ATTGACGTCG CAAAAGCTCA CGTCGATGTT 
TCCGTACTGG GTGCCAATCT GGACATCCGT CGATTCAACA ACGATGCCGA GGGCCACTCG
GCCCTGGCTG TTGCCCTTCA GCCGCTGAAC GTGCAGTTGG TCGTGATGGA GGCGACCGGT
GGCTACGAGA CCGAGCTGGC GTGCGCCTTG CAAGGTGCGG GTTTGCCGGT CGCTGTCGTC
AACCCTCGGC AAGCACGCGA TTTTGCCCGC TCGATGGGAC GTCTGGCCAA AACCGACGCC
ATCGACGCAC ATATGCTTGC CGAACTGGCT TCCGTGCTAC TGCGTCGGGA CGATCTGTCC
CGCTTGCTAC GTCCCGTTCC CGACGAGCGG CAGCAGTGGC TGGCTGCACT GGTGACCCGA
CGGCGCCAAC TACTCACCAT GCTCCTTTCG GAGCGACAGC GGCTCCAGAT CACGCCGGTT
GGTCTGCATC CAAGTCTGCT GGCTATCATT GCCGCCATCC AGGCACAACT CGATGACATC
GACGCTCAGA TGGTCGCTCA TGTACGCCAG CACTTCGGTG AACTCGACCG CCTGTTGCAG
TCCACACATG GAATTGGCCC GGTATCCAGC GCCTGCCTGA TCGCAGAACT GCCCGAATTG
GGCCGGCTCA ATCGCCGTCA GATTGCAGCC CTCGTTGGCG TCGCTCCCAT TGCTTGCGAT
TCCGGCTTAC GTAATGGGCG ACGACGGGTT CAAGGTGGCC GCTTCGCGAT CCGTCGCGTG
CTGTACATGG CTACATTGAC TGCCACACGC TACAACCCCG CCATCAGAGC CTTCTATCAA
CGCCTGAAGG CCGCCGGCAA ACTGTCCAAG GTCGCGCTTG TTGCCTGCAT GCGCAAGCTC
CTAACCATGC TCAATGCCAT GGTCAAAACC AACACGCCTT GGGACGATTC ACTTCATCGG
GCTTGA
 
Protein sequence
MSAPSAVTVG IDVAKAHVDV SVLGANLDIR RFNNDAEGHS ALAVALQPLN VQLVVMEATG 
GYETELACAL QGAGLPVAVV NPRQARDFAR SMGRLAKTDA IDAHMLAELA SVLLRRDDLS
RLLRPVPDER QQWLAALVTR RRQLLTMLLS ERQRLQITPV GLHPSLLAII AAIQAQLDDI
DAQMVAHVRQ HFGELDRLLQ STHGIGPVSS ACLIAELPEL GRLNRRQIAA LVGVAPIACD
SGLRNGRRRV QGGRFAIRRV LYMATLTATR YNPAIRAFYQ RLKAAGKLSK VALVACMRKL
LTMLNAMVKT NTPWDDSLHR A