| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1813 |
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| Symbol | hemC |
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| ID | 4093358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 2004855 |
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| End bp | 2005859 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638015093 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_621689 |
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| Protein GI | 162218053 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.57316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCCG AGACCCCCGC GGCCGGGCCG CAGCAGGCAC AGCCGCCCGC GACGTTGACG
ATTGCTTCGC GCGAGAGCCG CCTGGCGATG TGGCAAGCCG AACATGTGCG TGATGCGCTG
CGCAAATTAT ATCCAGCTTG TGACGTGAAA ATCCTCGGGA TGACGACGCG CGGCGATCAG
ATTCTCGATC GCACGCTGTC GAAGGTCGGC GGCAAGGGCC TGTTCGTGAA GGAACTGGAA
GCCGCGCTGG CCGACGGCCG CGCCGATCTC GCCGTGCATT CGCTGAAGGA CGTGCCGATG
GCGCTGCCCG ACGGCTTCTC GCTCGCCGCG ATCATGGAAC GCGAAGACCC GCGCGATGCC
TTCGTGTCGA ACGACTACGC GTCGCTCGAC GCGCTGCCGG CCGGCGCGGT CGTCGGCACA
TCGAGCCTGC GTCGCGAGGC GATGCTGCGG TCGCGTTATC CGCATCTCGA GGTCCTGCCG
CTGCGCGGCA ACCTCGACAC GCGGCTCGCG AAGCTCGACC GCGGCGACTA CGCGGCGATC
ATCCTCGCGG CCGCCGGCCT GAAACGCCTC GGCCTCGAAG CGCGGATTCG TGCGCTGCTC
GACGTCGAGG CCAGCCCGCC CGCGGCGGGC CAGGGCGCGC TCGGCATCGA GATCGCCGCG
CACCGCGACG ACGTCGCCGC GTGGCTCGCG CCGCTGCACG ACCCGCAGAC CGCGCTCGCG
GTCGAGGCCG AGCGGATGGT GTCGCGCGCG CTCGGCGGCA GTTGCGAGGT GCCGCTCGCC
GCGCACGCGG TGTGGCGCGC GGGCGAGCTG TACCTGACGG GACGCGTGTC GACCACCGAC
GGCAAGCGCG TGCTGACGGC CGAGGAATGC GGCGCGGTCG TGACCGTCGC CGATGCGCTC
GCGCTCGGCC GCGCGGTGTC CGACGAACTC GAGGCGCAAG GCGCGCTCGA CATCGTCCAG
GCGCTGCTCG CGAGCTCGCA GGCCGCGGGC AAGGGCGACG CCTGA
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| Protein sequence | MNSETPAAGP QQAQPPATLT IASRESRLAM WQAEHVRDAL RKLYPACDVK ILGMTTRGDQ
ILDRTLSKVG GKGLFVKELE AALADGRADL AVHSLKDVPM ALPDGFSLAA IMEREDPRDA
FVSNDYASLD ALPAGAVVGT SSLRREAMLR SRYPHLEVLP LRGNLDTRLA KLDRGDYAAI
ILAAAGLKRL GLEARIRALL DVEASPPAAG QGALGIEIAA HRDDVAAWLA PLHDPQTALA
VEAERMVSRA LGGSCEVPLA AHAVWRAGEL YLTGRVSTTD GKRVLTAEEC GAVVTVADAL
ALGRAVSDEL EAQGALDIVQ ALLASSQAAG KGDA
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