| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1797 |
|---|
| Symbol | |
|---|
| ID | 4093342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1984348 |
|---|
| End bp | 1985274 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638015077 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_621673 |
|---|
| Protein GI | 107023346 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.764878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCATC CCGATCTGCG CCGCCTCGAC CTGAATCTGC TGCTCGTATT CGACGCGCTG
TACCGCCATC GGTCTGTCGC GGCGGCCGCG CATGAGCTCG CGTTGAGCCC GTCGGCGTTG
AGCCACGCGC TCGCCCGGCT GCGCGACGCG ATCGGCGATG CGCTGTTCGT GCGCCTCGGC
AACGAGATGC AGCCGACCGT GCGCGCCGAC GACATCGCCA CCTGGGCCGG CGACGCGCTC
GACGCGATGT CGAAAGGGCT CGCCCGCGCG CGCCGCTTCG ATCCCGCGCA AAGCGACCGC
ACGTTCGTGT TCGCCGCGAC CGACTACACG GCGTTCGCGG TGCTGCCGGC GTTCCTCGCC
CGCATCCAGC ACGTGGCGCC GCACCTGCGG GTCCGCGTCG TCCATTCGGA CCGCAAGATT
TCCGTCGACG AACTCGCGGC CGGCCGCATC GACTTCGCGC TCGGCTACCA CGAGGAATCG
GCGGCCGACG CGCCGGGCAT CGAGGATTTC GACTGGTTCT CCGACGACTA CGTCGTGATC
GCGAGCGCCG CGCATCCGGA CATCCGGCGG CGGCTGACGC TCGACCAGTA CCTGGCGGCC
CGCCACGTGG TCGTCACGCC ATGGAACGAG TCGCGCGGTG TCGTCGACTA CGTGCTCGAC
CGGCTCGGTC TCGCGCGGCA TGTGGCCGTG CAGTTGCCGA CCGTGCTGGC CGCGCCGTTC
GTGATCGCGG AGTCGGCACT CCTGATGACG GTGCCGAACC GCGCCGCGCA GGCGCTGCGG
CATGCGGCGC CGATCCGCAT CTTCCCCGCG CCGTTCGAGA TCCCGCGCTA CACGGTGAAG
GTCTACTCGC ACGCGAAGCA TGCGCGCACC GATGCGCACC GCTGGATTCG CGCCCAGTTA
CTCGACGCAC GGCCGCCCCC AGACTAA
|
|---|
| Protein sequence | MMHPDLRRLD LNLLLVFDAL YRHRSVAAAA HELALSPSAL SHALARLRDA IGDALFVRLG
NEMQPTVRAD DIATWAGDAL DAMSKGLARA RRFDPAQSDR TFVFAATDYT AFAVLPAFLA
RIQHVAPHLR VRVVHSDRKI SVDELAAGRI DFALGYHEES AADAPGIEDF DWFSDDYVVI
ASAAHPDIRR RLTLDQYLAA RHVVVTPWNE SRGVVDYVLD RLGLARHVAV QLPTVLAAPF
VIAESALLMT VPNRAAQALR HAAPIRIFPA PFEIPRYTVK VYSHAKHART DAHRWIRAQL
LDARPPPD
|
|---|
| |