Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1794 |
Symbol | |
ID | 4093339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1982130 |
End bp | 1982843 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638015074 |
Product | amino acid ABC transporter permease |
Protein accession | YP_621670 |
Protein GI | 107023343 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.543432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAC TCATCCAAGA ATACTGGCGC AACTATCTGT ACACCGACGG CTATCGCATC ACCGGTGTCG CGATCACGCT GTGGCTGCTG GTCGTGTCGA TCGGCCTCGG CTTCTGCCTG TCGGTGCCGC TCGCCGTCGC GCGCGTGTCG AAGCGGAAGT GGCTGTCGGG CGCCGTATGG CTGTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTGCT CTGCTACACG GGCCTCTACA GCCTGCAGGC CGTGCGCGGC ACGCCGATGC TCGATGCGTT TTTCCGCGAC GGGATGCACT GCACGCTGCT CGCGTTCACG CTGAACACCT GCGCGTACAC CACCGAAATC TTCGCGGGCG CGATCAAGGC GACGTCGTAC GGCGAGATCG AAGCCGCGCG CGCGTACGGG ATGTCGCCGT TCACGATGTA TCGCCGCGTG ATCCTGCCGT CGGCGCTGCG CCGCGCGCTG CCGCTGTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGGTGGC CTTCACCGCG ACCGTGCCCG ACATCCTGAA GATCGCGCGC GACGTGAACT CGGCGACCTA CATGTCGTTC CACGCGTTCG GCATCGCCGC CCTGCTCTAC CTCGTGATCT CGTTCACGCT CGTGTGGCTG TTCCGCCAGG CCGAGCGTCG CTGGCTCGCG TATCTGCGCC CGCAAGGCAA GTAA
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Protein sequence | MIELIQEYWR NYLYTDGYRI TGVAITLWLL VVSIGLGFCL SVPLAVARVS KRKWLSGAVW LYTYVFRGTP LYVQLLLCYT GLYSLQAVRG TPMLDAFFRD GMHCTLLAFT LNTCAYTTEI FAGAIKATSY GEIEAARAYG MSPFTMYRRV ILPSALRRAL PLYSNEVILM LHATTVAFTA TVPDILKIAR DVNSATYMSF HAFGIAALLY LVISFTLVWL FRQAERRWLA YLRPQGK
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