Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1793 |
Symbol | |
ID | 4093338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1981444 |
End bp | 1982133 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638015073 |
Product | amino acid ABC transporter permease |
Protein accession | YP_621669 |
Protein GI | 107023342 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.720602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCTAC AAGGCTACGG CCCGCTGATC CTCGCCGGCA CCTGGCAAAC CGTCAAACTG GCGGTGCTTT CGCTTGCGCT GTCGTTCCTG CTGGGGCTGC TCGGCGCCGG CGCGAAGCTG TCGCGCAACC GCGTGACGAA CGGCGTCGGC ACCGTCTACA CGACGCTGAT CCGCGGCGTA CCCGATCTCG TGCTGATGCT GCTGCTGTTC TACAGCCTGC AGATCTGGCT GAACATGGCG ACCGACGCGC TCGGCTGGGA CCAGATCGAC ATCGACCCGT TCCTCGCCGG CGTGCTCGTG CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGCGCGTT CCTGTCGGTG CCGCGCGGCC AGCTCGAGGC CGGCAGCGCC TACGGGATGA CGAACTGGCA GGTGTTCACG CGGATCATGT TCCCGCAGAT GATGCGCTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG GTGCTCGTGA AGTCGACCGC GCTCGTGTCG ATCATCGGCC TGGCCGACGT CGTGAAGGCG TCGCAGGACG CCGGCAAGGG CACGCTGCGG TTCTTCTTCT TCACGCTGAT CGCGGGAGCG GTCTACCTCG CCATCACGAC GATCTCGAAC TTCGTGCTGA TGTGGCTCGA AAAGCGCTAC TCGACCGGTG TCCGCAAGGC TGACCTATGA
|
Protein sequence | MFLQGYGPLI LAGTWQTVKL AVLSLALSFL LGLLGAGAKL SRNRVTNGVG TVYTTLIRGV PDLVLMLLLF YSLQIWLNMA TDALGWDQID IDPFLAGVLV LGFIYGAYFT ETFRGAFLSV PRGQLEAGSA YGMTNWQVFT RIMFPQMMRF ALPGIGNNWQ VLVKSTALVS IIGLADVVKA SQDAGKGTLR FFFFTLIAGA VYLAITTISN FVLMWLEKRY STGVRKADL
|
| |