| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1752 |
|---|
| Symbol | |
|---|
| ID | 4092066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1944289 |
|---|
| End bp | 1945503 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638015031 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_621628 |
|---|
| Protein GI | 107023301 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCA CTGACATACA GGTGCGGAAC GCTAAGGCCA GCGCGGCACC ATACAAACTG
ACGGACGGCA ACGGGATGTT CTTGCTCGTC CAACCGAACG GCGCGAAGTA CTGGCGCTTG
TCCTACCGCT TCCGTGGCAA GCAGAAGACG CTCGCCCTCG GCGTCTATCC GGCCGTCACG
CTTGCGACGG CACGGAAGAA GCGCGACGAG GCCCGCGAGC AGATCGCAGC CGGCATCGAT
CCGGGCGAGG CGAAGAAGGA CGCAAGACGG GCCGCCGAGA TCGCGGCGGC AAACTCATTC
GAAGCGGTAG CCCGCGAGTG GTTCGACTCC CAGCGCCCGG GCTGGAGCGA CGGCTACGCG
GAGAAGGTGC TGAATTCGCT TGAGGTCGAC GTGTTCCCGA AGATCGGTGC TCGCCCGATC
GCGGAGATCG ACTCGCCGCA GATGCTCAGC ATCGTTCGCG AGGTCGAGGC GCGCGGGGTG
CGTGAGACGG CGAAGCGAAT CCTCCAACGC TCGCGCGCGG TCTTCCAGTA CGGGATCATG
ACCGGGCGAT GCTCCAGGAA TCCGGCAGCC GACATCGACG CGCAGACGGT CTTGAAGAAG
GGGCCCGGCG TACAGCACAT GGCCCGCGTG AAGGCGACGG AGATTCCGCA GCTCATGCGA
GACATCGACG CTTACCAAGG CGACCTAGTC ACCCGGCTCG CGCTCCGCCT GATGGCACTA
ACGTTTGTGC GGACAACGGA AATGATCCGT GCGGAGTGGT CGGAGTTTGA CGAGGCCGCC
GCAGAATGGC GCGTACCGCC GGAACGCATG AAGATGCGCG ACCCGCACAT CGTGCCGCTC
TCACGGCAGG CACTCGACGT GCTCGCCCAG CTCCGCGCGC TCAACGGCCA GCATCGATTC
GTGTTCTACA GCGTGCAAGG CCGGAGTCAC ATCTCGAACA ACACCATGCT CTACGCGCTC
TATCGCATGG GCTACAAGTC GCGGATGACG GGGCATGGCT TTCGCGGACT CGCCGCCACG
GCTCTACGTG AACTCGGCTT TGGCCGGGAC GTTGTAGAGC GCCAGATGGC GCACGCCGAG
CGCAATCAGG TGACGGCTGC CTACGTCCAC GCTGAATATC TGCCCGAGCG CAGACGAATG
ATGCAGGCGT GGGGTGATCA TCTCGACCAG CTCAAAGCGG GAGCCGAGGT CATCCGCATT
GCGTCAGCCC GTTAA
|
|---|
| Protein sequence | MPLTDIQVRN AKASAAPYKL TDGNGMFLLV QPNGAKYWRL SYRFRGKQKT LALGVYPAVT
LATARKKRDE AREQIAAGID PGEAKKDARR AAEIAAANSF EAVAREWFDS QRPGWSDGYA
EKVLNSLEVD VFPKIGARPI AEIDSPQMLS IVREVEARGV RETAKRILQR SRAVFQYGIM
TGRCSRNPAA DIDAQTVLKK GPGVQHMARV KATEIPQLMR DIDAYQGDLV TRLALRLMAL
TFVRTTEMIR AEWSEFDEAA AEWRVPPERM KMRDPHIVPL SRQALDVLAQ LRALNGQHRF
VFYSVQGRSH ISNNTMLYAL YRMGYKSRMT GHGFRGLAAT ALRELGFGRD VVERQMAHAE
RNQVTAAYVH AEYLPERRRM MQAWGDHLDQ LKAGAEVIRI ASAR
|
|---|
| |