| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1742 |
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| Symbol | |
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| ID | 4092940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1930262 |
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| End bp | 1932634 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638015020 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_621618 |
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| Protein GI | 107023291 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.451228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCACG CGAGCAGGAC GCCGCCCTCT TCGATGAGCT CTGCCCGGTC CAACCACACG
CCGCCGAACC GGCCGCTGCG CGCGCCGCGC AAGTCGCGCC GGCGTGCGCT GTTCGCCATC
CCGCTGCTCG GGATGCTGGC GCTCGCGCTG CTGTGGGCCG TGATCATCGC GCGTCTGTCC
GTCGAAAAGG ACAGTGCGTA CAAGGAAGCG GCGGCCTCCG CGGCGATCCT GTCGTCCGCG
CTCGAGCAGC ATACGGTCAA GGCGATCCAC CAAGTCGACC AGATCACCCG CTTCGTCAAG
TTCGAATTCG AGAAATCGCC GGCGCGCTTC AATCTCGCGA GCGCCGTCGA GAAAGGCGTC
GTGCCGAGCG ACACGCTGAT CCAGGTATCG CTCGTCAACG CGAAGGGCAT CCTGTTCGCG
AACACCGCCG AACTCCATCC GCAGCCGATC AACCTGTCCG ACCGCGAGCA CTTCAAGGTC
CACCTCGCGC ACAACGACGA CCGCCTCTTC ATCAGCAAGC CCGTGCTCGG CCGCGTGTCG
AGCCACTGGA CGCTGCAGAT GACGCGGCGC CTGAACAACC CGGACGGCAG CTTCGCGGGC
ATCGTCGTGG TGTCGGAAGA CCCGAGCTAC TTCACGAACG ATTTCTACAA CAACGCGGCC
ATCGGCAAGG AAGGCGTGAT CGCGGTCGTG TCCGATACGG GCGCAGTGCT CGCGCGGCGC
ACAGGCTCGG TGAGCAACGC GCCGGGCGCG TTTTCGGCGT CGGGCGTCTA CCCGATCGCC
GAGCGCGTGA CGGGCACGAT CATCGATCCG ATCGACGGCG TGACGCGCAT CGTGTCGTAC
CGCCACCTCG ACGGCTACCC GCTCGCGGTG ATGGTCGGCC TGTCGCAGAC GGAAGAGTTC
GCGGACTACA CCCACACGCG CAACGTCTAC CTGCTGATGA CGAGCTTCAT CACGCTCGCG
ATGCTCGCGT TTTTCGGCGT CGCGACGGGC CTGATCGGCA AGCTGCTCGG CCGCGAGCGC
GAAATGACGC AGCTCGCCGA ATACGACCTG CTCACCGGCC TCGCGAACCG CTATGCGACG
CTGCGCGGGC TGCGCAACGA CGTGTCGATG CCCGCGAGCC TGTCGCGGCT CGGCCTGCTG
TTCATCGATC TCGACAACTT CAAGACCGTC AACGGCACGC TCGGCCACAA CGCCGGCGAC
ATCGTGCTGC AGATGACCGC GTCGCGCCTG GCCGATGCGG TCGGCGACGA AGGTTCGCTC
GCGCGCATCG GCGGCGACGA GTTCGTCGTC GTGATGAAGG GCGACGACGT CGAGCGGCGC
GCGGTGCGGC TCGCGGAAGC GATCATCCGG ATGTTCGGCG AGCCGTTCGA CGTGCGCGGC
AGTTCGTTCG TGCTGCATGC GAGCATCGGC ATCGCGCTGC ACACCGTCGC GAACGAAAGC
GAGATCGACC TGCTGAAAAA GGCCGACCTC GCGATGTACA GCGCGAAGGA CGCCGGCAAG
AACTGCTACC AGTTCTATGC GCCGCACCTG TCGCACCGGG CCGACCATCT GATGCGCTGG
GAACAGCAAT TGCGCGTCGC GCTCGCCGAG GGGCAGTTGT TCCTCGCGTA CCAGCCGAAG
ATCGACCTCA CGCATCGCAC CATCACCGGC TTCGAGGCGC TCGCACGCTG GGATCACCCC
GAGCACGGCG TCATCTCCGC GAACGAATTC ATTTCGATCG CCGAATCGAC CGGCCTGATC
GTGCCGATCG GCGACTTCGT GATCCGCACC GCGTGCGAGC AGATCGCGCG CTGGCGCGAC
GAAGGCCACG ACACGCTGAC GCTCGCGGTC AACATCTCGC CCGTGCAGTT CTGGCGCGGC
GACCTGATCG AGACGATCTC GCAGGCGCTG CAGGACACCG GCATCCCCGC GAACCGGCTC
GAGATCGAGA TCACCGAGAC CGCGATGATG GAATATCCGG AACTCGTGTC CGAGAAGATC
GTCGCGCTGA AAAAGCTCGG CATCCGGATC GCGCTCGACG ATTTCGGCAC CGGCTATTCA
TCGCTGTCGT ACCTGCACCG CTTCTCCGTC GATACGCTGA AGGTCGACCG CTCGTTCGTG
CAGGCGATTC CGAACGACCG CAGCGTGTGC GTGATGGTGT CGTCGATCGT GCATCTCGCG
CGCTCGCTCG GGCTGACGGT CGTCGTCGAG GGCACCGAGA CCGAGGAGCA GATCACGTGG
CTGTCCGCGC TCGGCGAAAT CGAGGCGCAG GGCTTCCTGT TCTCGCGCCC GGTGCCGGCC
GATGCGATTC CCGCGCTGAT CGCCCGCTTC GGCGTGCGCG GCGAGCATCC GAATGTCGTC
GCGCATCGCG CGACCGGCAG CACGGGCGCC TGA
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| Protein sequence | MAHASRTPPS SMSSARSNHT PPNRPLRAPR KSRRRALFAI PLLGMLALAL LWAVIIARLS
VEKDSAYKEA AASAAILSSA LEQHTVKAIH QVDQITRFVK FEFEKSPARF NLASAVEKGV
VPSDTLIQVS LVNAKGILFA NTAELHPQPI NLSDREHFKV HLAHNDDRLF ISKPVLGRVS
SHWTLQMTRR LNNPDGSFAG IVVVSEDPSY FTNDFYNNAA IGKEGVIAVV SDTGAVLARR
TGSVSNAPGA FSASGVYPIA ERVTGTIIDP IDGVTRIVSY RHLDGYPLAV MVGLSQTEEF
ADYTHTRNVY LLMTSFITLA MLAFFGVATG LIGKLLGRER EMTQLAEYDL LTGLANRYAT
LRGLRNDVSM PASLSRLGLL FIDLDNFKTV NGTLGHNAGD IVLQMTASRL ADAVGDEGSL
ARIGGDEFVV VMKGDDVERR AVRLAEAIIR MFGEPFDVRG SSFVLHASIG IALHTVANES
EIDLLKKADL AMYSAKDAGK NCYQFYAPHL SHRADHLMRW EQQLRVALAE GQLFLAYQPK
IDLTHRTITG FEALARWDHP EHGVISANEF ISIAESTGLI VPIGDFVIRT ACEQIARWRD
EGHDTLTLAV NISPVQFWRG DLIETISQAL QDTGIPANRL EIEITETAMM EYPELVSEKI
VALKKLGIRI ALDDFGTGYS SLSYLHRFSV DTLKVDRSFV QAIPNDRSVC VMVSSIVHLA
RSLGLTVVVE GTETEEQITW LSALGEIEAQ GFLFSRPVPA DAIPALIARF GVRGEHPNVV
AHRATGSTGA
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