Gene Bcen_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1722 
Symbol 
ID4092920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1911246 
End bp1912457 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID638015001 
Productbenzoate transporter 
Protein accessionYP_621599 
Protein GI107023272 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.982368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTT CGTCCACCGC GAGTGCCGGC CGCGCCGGCG GCCGCCGCTT TTTCGCCGAT 
ACGTCCGTGT CCGCGCTCGT CGCCGGCTTC GTCGCGATGA TGACCGGCTA CACGAGTTCG
CTCGTGCTGA TGTTCCAGGC CGGCCGCGCC GCCCACCTCA CCGATGCGCA GATCTCGTCG
TGGATCTGGG CGCTGTCGAT CGGCATGGCG GTGACGACGA TCGGCCTGTC GCTGCGCTAC
CGCGCGCCCG TCGTGGTCGC GTGGTCGACG CCCGGCGCCG CGCTGCTGAT CGCGTCGCTG
CCCGGCGTGC CCTACCCCGA GGCGATCGGC GCGTTCGTCG TATGCGCGCT GCTGCTGACG
GCCGTCGGCG TGAGCGGCCT GTTCGACACG CTGATGAAGC GCATTCCGGC CGGCATCGCG
GCCGCGCTGC TCGCGGGCAT CCTGTTCGAG ATCGGCATCG AGATCTTCCG CGCCGCGCAG
TTCCAGACCG CGCTGGTGCT CGCGATGTTC TTCACCTACC TGATCGTGAA GCGCCTCGCG
CCGCGCTATG CGATCGTGAC GACGCTGATC GTCGGCACAG TGGTAGCCGG CGGCCTCGGC
CTGCTCGATT TCAGCCGCTT CCACATCGCG CTCGCGCAGC CGGTGTTCAC GATGCCCGCG
TTCTCGATCG CGTCGATCGT CAGCATCGGC ATTCCGCTGT TCGTCGTCGC GATGGCGTCG
CAGAACGTAC CGGGCATCGC GGTGCTGCGT GCGGACGGCT ACCCGACGCC GTCGTCGCCG
CTGATCGCGA CGACCGGCCT CGCGTCGCTG CTGCTCGCGC CGTTCGGCTC GCACGGCGTG
AACCTCGCGG CGATCACGGC CGCGATCTGC ACCGGCCCCG AAGCGCACGA GGACCACGCG
AAGCGCTACA CGGCCGCCGT GTGGTGCGGC ACGTTCTACC TGGTCGCCGG CGTCTTCGGC
GCGACGATCG CCGCGTTGTT CGCGGCGCTG CCGAAAGCGC TCGTCGTGTC GGTCGCGGCG
CTCGCGCTGT TCGGCTCGAT CATGAGCGGC CTCGCGAACG CGATGCAGGA CGTGAAGCAG
CGCGAAGCGG CGCTCGTCAC GTTCATGGTG ACCGCGTCGG GCCTCACGCT GCTGTCGATC
GGCTCGGCAT TCTGGGGGCT CGTCGCCGGG GTCGTCACGC AGGTGATCCT GAACGCGCGG
CGCCCCGCGT GA
 
Protein sequence
MNPSSTASAG RAGGRRFFAD TSVSALVAGF VAMMTGYTSS LVLMFQAGRA AHLTDAQISS 
WIWALSIGMA VTTIGLSLRY RAPVVVAWST PGAALLIASL PGVPYPEAIG AFVVCALLLT
AVGVSGLFDT LMKRIPAGIA AALLAGILFE IGIEIFRAAQ FQTALVLAMF FTYLIVKRLA
PRYAIVTTLI VGTVVAGGLG LLDFSRFHIA LAQPVFTMPA FSIASIVSIG IPLFVVAMAS
QNVPGIAVLR ADGYPTPSSP LIATTGLASL LLAPFGSHGV NLAAITAAIC TGPEAHEDHA
KRYTAAVWCG TFYLVAGVFG ATIAALFAAL PKALVVSVAA LALFGSIMSG LANAMQDVKQ
REAALVTFMV TASGLTLLSI GSAFWGLVAG VVTQVILNAR RPA