Gene Bcen_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1713 
Symbol 
ID4091044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1903906 
End bp1904538 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID638014992 
ProductTetR family transcriptional regulator 
Protein accessionYP_621590 
Protein GI107023263 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.312899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CAAAAATCAA AAGAGATCCT GAAGGTACGC GCCGCCGCAT CCTGATGGCG 
GCAGCCGAAG AGTTCGCGAA TGGAGGGCTG TTCGGCGCGC GCGTCGACCA GATCGCGCGC 
CGGGCCGAAA CGAACGAGCG CATGCTCTAT TACTACTTCG GCAGCAAGGA GCAGCTGTTC 
ACGGCGGTGC TCGAACACGC GTTCTCCGCG CTGACCGAGG CCGAGCGCGT GCTGGATCTC 
GACGGCGTCG CGCCGGTCGA AGCCGTCACG CGGCTCGCGC ATTTCGTTTG GGACTACTAC 
CGCGACCATC CGGAGCTGCT CAGGCTCATC AACAACGAGA ACCTGCACGA AGCGCGCTAT 
CTGCACAAGT CGACGCGGAT CCGCGAGATG ATGTCGCCGA TCGTCGCGAA GCTCGGCAAC 
GTGCTGATGC GCGGCCAGAA GGCCGGGCTG TTCCGCGGCG ACGTCGATCC GCTGCGCTTC 
TACGTGACGT TGTCCGGGCT CGGCTACTAC ATCGTGTCGA ACCGCTTCAC GCTCGCCGCG 
ACGCTCGGCC GCGACTTCAC CGACACCGAC GAGCGCGCGG AGATGGTCCG GATGAACACT 
GAGGTGCTGC TCGCTTATCT GCTGCGGCGC TGA
 
Protein sequence
MNQPKIKRDP EGTRRRILMA AAEEFANGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF 
TAVLEHAFSA LTEAERVLDL DGVAPVEAVT RLAHFVWDYY RDHPELLRLI NNENLHEARY 
LHKSTRIREM MSPIVAKLGN VLMRGQKAGL FRGDVDPLRF YVTLSGLGYY IVSNRFTLAA 
TLGRDFTDTD ERAEMVRMNT EVLLAYLLRR