| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1710 |
|---|
| Symbol | |
|---|
| ID | 4091041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 1898850 |
|---|
| End bp | 1900097 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638014989 |
|---|
| Product | 3-carboxymuconate cyclase-like |
|---|
| Protein accession | YP_621587 |
|---|
| Protein GI | 107023260 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2706] 3-carboxymuconate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.446688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACC GTTTACGCGA GCGTGACGCA CGCGCTTCGA CACGAGGGTT CCCGCTTAGG
TTCGCTCACT GGATGAAAGG TTTCGCGATC GTGCTTTCCC TGTCCGCGAC CCACGCATTC
GCGCAGCAAT CGTCCGCCCC GGCCGACGGC GTCTACAACC TGCTCGTCGG CACCTATACG
GGCGGCGGCA GCGACGGGAT TTACGTTTAC CGCTTCGATA CCAAGAGCGG CAGCGTCGCG
CCGGTGTCGT CGGCGAAGAC CGTGAATCCG TCGTACCTGT TGCCGAGCCG CGACGGTCGC
ACCGTCTACG CGGTCAACGA ACTGCCCGGC GACGACGGGC CGGCGACGCA GCGCGGCGGC
GTGAGCGCGT TCCGCTTCGA CGCGAAGACG GGCGCGCTGA GCTTCATCGA CCGCGTATCG
TCGGAAGGGA ACGATCCGTG CTATCTCGCG CTGTCGCCGG ACGGCAAGTA CCTCGTCACC
GCCAACTACT CGGTCGCGGC CGACCCGGGC GGCAGCTTCG CGGTGCTTCC GCTGCGCGAC
GACGGCGCGG TCGGTCAGGC AGTGCTGACG GTCCACCACG AAGGCACCGG GCCGGTGAAG
GGCCGCCAGG ACGGCGCGCA CGTGCATTCG ACGGTGTTTT CGCCGGACGG CCGCTATCTG
TTCGTGCAGG ATCTCGGCGC GGACAAGATC TACGGCTACC GCTACACGGT GGACGGCAGC
CGCGGGCTGA TCAGCCCGAC CGACACGCGC TACACGCCGG TGAAGGCGGG CTCGGGCCCG
CGTCACATGG TGTTCAGCGC CGACGGCCGG TTCGCGTACG TGACGAGCGA ACTCAACGCG
TCGGTCGAGG TGTTCGGCTA TCACGACGGC AAGCTGACGC CGATCGAGAC GCTGCCGATG
ACGGCGCCCG GCTTCAAGGG CAAGGTCGGC GGCGGCGCGA TCCACCTGTC GCCGGACGGC
CGCTTCCTGT ACGCGAGCAA CCGCGGCGAC GCGAACGACC TCGTGATCTA CGCGGTGAAC
AAGGCCGACG GCCGGCTGAA GCACGTCGGC CGCCAGTCGA GCCTCGGCAA GACGCCGCGC
GAGTTCCTGA TCGATCCGAC CGGCAAGTGG CTGATCGTCG GCAACCAGGA CAGCGACACG
TTCTACGTGT TCAGTCGCGA TGTCGAAACG GGGCAGCTCG GCGCGAATCC GCAGAAGATC
GCGGTCGGCA AGCCGGTCGA TTTCAAGCTG GTGCCGGTCG CCCAGTAA
|
|---|
| Protein sequence | MPNRLRERDA RASTRGFPLR FAHWMKGFAI VLSLSATHAF AQQSSAPADG VYNLLVGTYT
GGGSDGIYVY RFDTKSGSVA PVSSAKTVNP SYLLPSRDGR TVYAVNELPG DDGPATQRGG
VSAFRFDAKT GALSFIDRVS SEGNDPCYLA LSPDGKYLVT ANYSVAADPG GSFAVLPLRD
DGAVGQAVLT VHHEGTGPVK GRQDGAHVHS TVFSPDGRYL FVQDLGADKI YGYRYTVDGS
RGLISPTDTR YTPVKAGSGP RHMVFSADGR FAYVTSELNA SVEVFGYHDG KLTPIETLPM
TAPGFKGKVG GGAIHLSPDG RFLYASNRGD ANDLVIYAVN KADGRLKHVG RQSSLGKTPR
EFLIDPTGKW LIVGNQDSDT FYVFSRDVET GQLGANPQKI AVGKPVDFKL VPVAQ
|
|---|
| |