Gene Bcen_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1625 
Symbol 
ID4093735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1805204 
End bp1806694 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content62% 
IMG OID638014904 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_621503 
Protein GI107023176 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.209377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCTT TTCCGATTCT CAGTACCGCG ATCTGGCTGC CGATCGTTTT CGGCCTCCTC 
GTGCTGGCGG TAGGTAACGA CAAAAATCCG GGGACGGCCC GCTGGGTTGC GCTGATCGGC
GCGCTGCTCG GCCTCGCGGT CACGATCCCG TTGATCACGG GCTTCGACTC GAGCACGGCC
GCACTGCAGT TCGTCGAGAA GTCGACCTGG ATCGAACGCT TCGACATTGC GTATCACCTC
GGCGTCGACG GCATCTCGAT GTGGTTCGTC GTGCTGACCG CGCTGATCAC GGTGATCGTC
GTGATCGCCG CATGGGAAGT GATCACCGAG AACGTCGCGC AGTACCTCGC GGCATTCCTG
ATCCTGTCCG GGATCATGAT CGGCGTGTTC TCGGCGGCCG ACGGCCTGCT GTTCTACGTG
TTCTTCGAGG CGACCCTGAT CCCGATGTAC ATCATCATCG GCGTGTGGGG CGGCCCGAAC
CGCGTGTATG CGGCATTCAA GTTCTTCCTG TACACGCTGG CCGGCTCGCT GCTGATGCTG
GTCGCGCTGA TCTACCTGTA CACGGAAACG CATTCGTTCG ACCTCGCGAC GTGGCAGAAC
GCGAAGATCG CGATGACGCC ACAGATCTTG CTGTTCATTG CCTTCTTCCT CGCGTTCGCG
GTGAAGGTGC CGATGTGGCC GGTGCACACG TGGCTGCCGG ACGCGCACGT GGAAGCGCCG
ACAGGCGGCT CGGTCGTGCT GGCTGCGATT ATGCTGAAGC TCGGCGCATA CGGTTTCCTG
CGCTTCTCGC TGCCGATCAC GCCTGACGCG AGCCACTTCC TGGCACCCGT CGTGATCACG
CTGTCGCTGA TCGCGGTGAT CTACATCGGC CTCGTCGCGA TGGTGCAGGC CGACATGAAG
AAGCTGGTCG CGTATTCGTC GATCGCGCAC ATGGGCTTCG TCACGCTCGG CTTCTTCATC
TTCAACCAGC TCGGCGTCGA AGGCGCGATC ATCCAGATGA TCTCGCACGG CTTCGTGTCG
GGCGCGATGT TCCTCTGCAT CGGCGTGTTG TACGACCGCG TGCACTCGCG CCAGATCGCC
GACTACGGCG GCGTCGTGAA CGTGATGCCG AAGTTCGCGG CATTCGCGAT GCTGTTCTCG
ATGGCCAACT GCGGCCTGCC GGGTACGTCG GGTTTCGTCG GCGAGTTCAT GGTGATTCTC
GCGGCCGTCC AGTACAACTT CTGGATCGCA TTCGGCGCGG CATTCACGCT GATCCTCGGC
GCGGCCTACA CGCTGTGGAT GTACAAGCGC GTGTATTTCG GCGCGGTGGC GAACGATCAC
GTCGCCAAGC TGAAGGACAT CGGCCGTCGC GAATTCCTGA TGCTGGCCGT GCTCGCCGCG
TTCACGCTGC TGATGGGCCT GTATCCGAAG CCTTTCACCG ACGTGATGCA CGTTTCCGTC
GAAAACCTCC TCTCCCACGT CGCGCAGTCG AAGCTGCCGC TGGCCCAGTA A
 
Protein sequence
MHAFPILSTA IWLPIVFGLL VLAVGNDKNP GTARWVALIG ALLGLAVTIP LITGFDSSTA 
ALQFVEKSTW IERFDIAYHL GVDGISMWFV VLTALITVIV VIAAWEVITE NVAQYLAAFL
ILSGIMIGVF SAADGLLFYV FFEATLIPMY IIIGVWGGPN RVYAAFKFFL YTLAGSLLML
VALIYLYTET HSFDLATWQN AKIAMTPQIL LFIAFFLAFA VKVPMWPVHT WLPDAHVEAP
TGGSVVLAAI MLKLGAYGFL RFSLPITPDA SHFLAPVVIT LSLIAVIYIG LVAMVQADMK
KLVAYSSIAH MGFVTLGFFI FNQLGVEGAI IQMISHGFVS GAMFLCIGVL YDRVHSRQIA
DYGGVVNVMP KFAAFAMLFS MANCGLPGTS GFVGEFMVIL AAVQYNFWIA FGAAFTLILG
AAYTLWMYKR VYFGAVANDH VAKLKDIGRR EFLMLAVLAA FTLLMGLYPK PFTDVMHVSV
ENLLSHVAQS KLPLAQ