Gene Bcen_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1612 
Symbol 
ID4093722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1794503 
End bp1795000 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID638014891 
Producthypothetical protein 
Protein accessionYP_621490 
Protein GI107023163 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCT CTCTCGCCCC GCATGCCGCA CACCGCGTCG TGCTCGACTC GAACGTCTGG 
ATCGACATTC TCGTATTCGA CGACCCCGCT ACGCGCCCGA TCCGTGCCGC GCTGGAGCAC
GGCACGCTGG CCGCCGTGAT CGACGGCCGC TGCCTGACCG AACTCGAATA CGTGCTCGAC
TATCCGCAGT TCCAGTCGCG CGCGATCGAC AAAGCGGCCG CGCTCGCAAC GGTCGCCCGG
CTCGCGAGCC TCGTCGAGCC GCCGCCCCTC GACGCCGACG CGCCGCCGCT GCCGAAGTGC
AAGGACCGCG ACGACCAGAA ATTTCTCGAA CTCGCCCGCG CCGCGCAGGC CGATTGGCTC
GTGTCGAAAG ACCGCGCGCT GCTGAAGCTC GCGAAACGCA CCGCACGCGA CTTCGGTTTC
CGGATCGCAC AACCCGCGCC GTTTGCCGAA GCCTGCGCCC TCGACGCCGC GCCGCCCGCC
ACGGCGACGC CGGCCTGA
 
Protein sequence
MTRSLAPHAA HRVVLDSNVW IDILVFDDPA TRPIRAALEH GTLAAVIDGR CLTELEYVLD 
YPQFQSRAID KAAALATVAR LASLVEPPPL DADAPPLPKC KDRDDQKFLE LARAAQADWL
VSKDRALLKL AKRTARDFGF RIAQPAPFAE ACALDAAPPA TATPA