Gene Bcen_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1580 
SymbolgroEL 
ID4092865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1753907 
End bp1755529 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content66% 
IMG OID638014854 
Productchaperonin GroEL 
Protein accessionYP_621458 
Protein GI107023131 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAA AAGACGTGAA ATTCCGCGAT GGCGCGCGCC AGCAGATCGT CAAGGGCGTG 
AACGTGCTGG CCGACGCGGT GAAGGTGACG CTCGGCCCGA AAGGCCGCAA CGTCGTGATC
GAGCGCGGCT TCGGCGCGCC GGTGATCACG AAGGACGGCG TGTCGGTCGC GAAGGAAATC
GAGCTGAAGG ACCGCTTCGA GAACATGGGC GCGCAGATCG TCAAGCAGGT CGCGTCGAAG
ACGGCCGACG TGGCCGGCGA CGGGACCACC ACCGCCACCG TGCTCGCGCA GGCGATCGTG
CAGGAAGGCA TGAAGCACGT CGCGGCCGGC ATGAATCCGA TGGATCTGAA GCGCGGCATC
GACAAGGCCG TCGGCGCGGT GCTCGACGAG CTGCGCAAGC TGTCCCGGCC GATTTCGACC
CACAAGGAAA TCGCGCAGGT CGGCGCGATT TCCGCGAACT CGGACGAGGC GATCGGCAAG
ATCATCGCCG ACGCGATGGA GAAGGTCGGC AAGGACGGCG TGATCACCGT CGAGGACGGC
AAGTCGCTCG AGAACGAACT CGACGTGGTC GAAGGCATGC AGTTCGATCG CGGTTACGTG
AGCCCGTATT TCATCAACGA TCCGGCGAAG CAGGCGGCCT ATCTCGACGA CGCGCTGATT
CTGCTGCACG ACAAGAAGAT TTCCAGTGTC CGCGACCTGC TGCCGATTCT CGAAGCGGCG
TCCAAGGCCG GCAAGCCGCT GCTGATCGTG GCCGAGGATG TCGAGGCCGA AGCGCTCGCG
ACGCTCGTCG TGAATTCGAT GCGCGGCATC CTGAAGGTCG CCGCCGTCAA GGCGCCGGGT
TTCGGCGACC GGCGCAAGGC CATGCTGGAG GATCTCGCGA TCCTGACCGG CGCGACCGTC
ATCTCGGAGG AAACCGGCAA GCAGCTCGAC AAGGCCACGC TGGAGGATCT TGGCAGTGCG
AAGCGTGTCG AGGTGCGCAA GGACGACACG ATCATCATCG ACGGCGCGGG CGATGCGGCA
CGCATCGAGG CGCGCGTGAA GTCGATTCGC GTGCAGATCG ACGAAGCGAC GAGCGACTAC
GATCGTGAGA AGCTGCAGGA GCGTGTCGCG AAGCTCGCGG GCGGCGTGGC GGTGATCAAG
GTCGGCGCGG TTACCGAAGT CGAAATGAAG GAGAAGAAGG ACCGGGTCGA CGATGCGCTG
CATGCGACGC GTGCGGCGGT CGAGGAGGGC ATCGTGCCGG GCGGCGGCGT CGCGCTGCTG
CGTGCGCGCG CGGCGCTGTC GGACATCCGG GGCGCGAATG CGGACCAGGA TGCCGGCATC
CGGATCGTGC TGCGTGCGCT GGAGGCGCCG CTGCGTGTCA TCGCGGCCAA TGCCGGCGAC
GAACCGTCGG TCGTGATCTC GAAGGTGCTC GAAGGCAAAG GGAACTTCGG CTACAACGCG
GCGACCGGCG AGTACGGCGA TCTGGTGGAC GCAGGCGTGG TCGACCCGAC CAAGGTCACG
CGTACCGCGC TGCAGAACGC CGCGTCGATC GCGAGCCTGG TGTTGACGAC CGATGCGACC
GTCGCCCAGG CGCCGAAAGA GGAGAGCGCC GAGTCGGCCC CCGCGCCCGA ACTCGGCTAC
TGA
 
Protein sequence
MTAKDVKFRD GARQQIVKGV NVLADAVKVT LGPKGRNVVI ERGFGAPVIT KDGVSVAKEI 
ELKDRFENMG AQIVKQVASK TADVAGDGTT TATVLAQAIV QEGMKHVAAG MNPMDLKRGI
DKAVGAVLDE LRKLSRPIST HKEIAQVGAI SANSDEAIGK IIADAMEKVG KDGVITVEDG
KSLENELDVV EGMQFDRGYV SPYFINDPAK QAAYLDDALI LLHDKKISSV RDLLPILEAA
SKAGKPLLIV AEDVEAEALA TLVVNSMRGI LKVAAVKAPG FGDRRKAMLE DLAILTGATV
ISEETGKQLD KATLEDLGSA KRVEVRKDDT IIIDGAGDAA RIEARVKSIR VQIDEATSDY
DREKLQERVA KLAGGVAVIK VGAVTEVEMK EKKDRVDDAL HATRAAVEEG IVPGGGVALL
RARAALSDIR GANADQDAGI RIVLRALEAP LRVIAANAGD EPSVVISKVL EGKGNFGYNA
ATGEYGDLVD AGVVDPTKVT RTALQNAASI ASLVLTTDAT VAQAPKEESA ESAPAPELGY