Gene Bcen_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1572 
Symbol 
ID4092857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1747900 
End bp1748502 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID638014846 
ProductTetR family transcriptional regulator 
Protein accessionYP_621450 
Protein GI107023123 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAGCCA ACAAACGCCA GCTGGTGGTA GACAAAGCGA CCGAACTGTT CTCGAGGCAC 
GGTTTCCACC CGGTGGGCGT GGACTGGATC ATCGACGATT CCGGTGTCGC CCGAATGACG 
CTGTACCGGC ATTTTGCGAG CAAGGACGAG CTCATCCGCG AAGTGCTGGT CCAGCGCTAC 
GACCTGATCG TCGGCAGCAT CGACGCGCAG CTGCAGCACG TCGTCGATCC GGTCGAGCGC 
GTCAAGACCA TCTTCGACTG GTATGAAGCG TGGTTCCGCA CACCGGAATT TGCCGGCTGC 
CTGTTCGAAC GTGCGCTGGC CGAATTCGGC ACCGCTTACG CGCCGATCTC GGATGTCGCG 
ATCCGCTATC GCCGCAAAAT GGTCGAATGG ATCGCAGAAC TGATCGAAGC CCTCGTGCCG 
CCCGAAACCG CGAACCGGCT GGCGACCGTC TTCATGATGC TGCTGGACGG CGCCACGGTC 
GACGCGCGGG CATTCAACGA TTCCGCGGCT GCCGCGCGCG CGTGGCAGGC CGCGCATGCC 
CTTCTCGAAC AGGCGATGCA CGCGACGGTC TCGCCCGCCG ACGGTGCGGC CAACCCGACG 
TAA
 
Protein sequence
MRANKRQLVV DKATELFSRH GFHPVGVDWI IDDSGVARMT LYRHFASKDE LIREVLVQRY 
DLIVGSIDAQ LQHVVDPVER VKTIFDWYEA WFRTPEFAGC LFERALAEFG TAYAPISDVA 
IRYRRKMVEW IAELIEALVP PETANRLATV FMMLLDGATV DARAFNDSAA AARAWQAAHA 
LLEQAMHATV SPADGAANPT