Gene Bcen_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1566 
Symbol 
ID4092678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1742807 
End bp1743730 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID638014840 
Productdihydrodipicolinate synthetase 
Protein accessionYP_621444 
Protein GI107023117 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAA TCGATCTGCG CGGTTTGGTC CCGGCACCCG TTACCCCTTT CACCCGCGAG 
GGCGCGGTGG ACCATGCCGC CATTCAACGG CTGGGCGCAT GGCTCGGCGG CATCGAAGGC
GTCAAAGGTC TGACGGTACT CGGGCACGCA GGCGAAGGCA CGTTCCTCTC GCAGAAAGAA
CAGGCTCAAG TCATCGAAAG CTTCGTGAAG TCCGTCGACG GCAAGATTCC GGTCATCGCC
GGTATCACGC TCGAAGGCAC GGAAGTGGCG GTGGAAGAGG CGAAGCGCGC GGTGGAGGCC
GGCGCGTCGG CCGGTCTGGT GTATCCGTCG CACGGCTGGC TGCGCTTCGG CTATCAGAAA
GGCGCGCCGC AGGATCGCTA CCGCGCGATC CACGAGGGCA GCGGCCTGCC GCTCATCCTG
TTCCAGTACC CGGACGCCAC CAAGGCGACC TACAACCTCG AAACACAGCT GGAAATCGCC
GCGCAACCGG GCGTCTTCGC GATGAAAAAC GGCGTACGCA ACATGCGTCG CTGGGACGTC
GAGATTCCGA TCATCCGACG CGAGCGTCCG GAACTGCAAA TCCTGACCTG CCACGACGAG
TATCTGCTTC ACACGATGTT CGACGTCGAC GGCGCGCTCG TCGGATACGG CGGCCTGGCT
CCCGAGCCGC TCATCGAACT GATCAAGGCA GGCAAGGCGA AAGACTACCC GGCCGCCCGC
GCGATTCACG ATCGCCTGCT GCCGGTGACG CGCAACGTGT ATCACCGCGG GTCGCACATG
GAAGGCACCG TCGCGCTCAA GCATGGCCTG GTGGCCCGCG GCATCCTCGA GCACGCCACC
GTGCGCTCGC CGTTGCTGCC GCTCGCGCAA GGCGCGGACG TTGAAATCGC GGACGCGCTT
CGTTCGGCCG GCCTCGTCGA CTGA
 
Protein sequence
MKAIDLRGLV PAPVTPFTRE GAVDHAAIQR LGAWLGGIEG VKGLTVLGHA GEGTFLSQKE 
QAQVIESFVK SVDGKIPVIA GITLEGTEVA VEEAKRAVEA GASAGLVYPS HGWLRFGYQK
GAPQDRYRAI HEGSGLPLIL FQYPDATKAT YNLETQLEIA AQPGVFAMKN GVRNMRRWDV
EIPIIRRERP ELQILTCHDE YLLHTMFDVD GALVGYGGLA PEPLIELIKA GKAKDYPAAR
AIHDRLLPVT RNVYHRGSHM EGTVALKHGL VARGILEHAT VRSPLLPLAQ GADVEIADAL
RSAGLVD