| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1562 |
|---|
| Symbol | |
|---|
| ID | 4092674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 1737556 |
|---|
| End bp | 1738536 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638014836 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_621440 |
|---|
| Protein GI | 107023113 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGA AACCGTTCCG CGTGTCCGAA CACGAATTGC GCGTGTCGGC CAGTATCGGC
ATTGCGCTCT ATCCCGGCAA CGGCAGCGAT TTTCGCGACC TGATGACCAA CGCCGATGCA
GCGATGTATC ACGCCAAGGC ACTCGGCCGG AACGCGTACT GCTTCTTCGA GGCATCGATG
AACGCGAATG TCCGCGAGCA CCTGAAAATC GTGCAGGAGC TCCGTCTGGC GCTGGAGCGG
CGTGAGCTGG TCCTGCATTA CCAGCCGAAG TTCGACGTCC CGCACGGACC GATCATCGGC
GTCGAGGCGC TGTTGCGATG GATGCACCCG ACACGCGGTC TCATTTCACC CGATCAGTTC
ATCTCGATTG CGGAAAAGAC CGGCTTGATC GTGCCGATCG GCGAGTGGGT GCTGGACGAG
GCCTGCCGGC AGATGCGCGT GTGGTGCGAT GCCGGTCGAA CCGACTGGAC GATGGCCGTC
AACCTGTCAC CGCTGCAATT CGGTCACGCG AGTCTGATCC GGGTCGTGGA GGCCACATTG
CAGCGGCACG CGCTGGAGCC GCACTGCCTG ACGCTGGAGA TCACGGAATC GACCGCGATG
CGCGATGCGG ACGCCAGCTT GAGAATCCTG CAGCAGCTTC ACGACATGGG CGTGCGCATT
TCCATCGACG ACTTCGGAAC GGGTTATTCA AGCTTGCTGT ATCTGAAGCG CTTGCCGGCC
AGCGAGCTCA AGATCGACCG GGGATTCATC CGCGATCTCG AACACGATAC CGAAGATGCC
GCGATCATTT CGGCGATCGT CGCGCTCGGC CGGGCACTCG ACCTGAAGAT CGTCGCGGAG
GGCGTTGAAA CGGCGGCCCA GCAGCAGTTC CTGACCCGCC TCGGTTGCAA CTCGCTGCAG
GGTTTTCTGC TCGGGCGCCC GATGCCGGCG GATCACTTCG TCGAAATGAC CACGCAAGGC
ACGGCGATCA AGCCTGTTTG A
|
|---|
| Protein sequence | MIRKPFRVSE HELRVSASIG IALYPGNGSD FRDLMTNADA AMYHAKALGR NAYCFFEASM
NANVREHLKI VQELRLALER RELVLHYQPK FDVPHGPIIG VEALLRWMHP TRGLISPDQF
ISIAEKTGLI VPIGEWVLDE ACRQMRVWCD AGRTDWTMAV NLSPLQFGHA SLIRVVEATL
QRHALEPHCL TLEITESTAM RDADASLRIL QQLHDMGVRI SIDDFGTGYS SLLYLKRLPA
SELKIDRGFI RDLEHDTEDA AIISAIVALG RALDLKIVAE GVETAAQQQF LTRLGCNSLQ
GFLLGRPMPA DHFVEMTTQG TAIKPV
|
|---|
| |