Gene Bcen_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1560 
Symbol 
ID4092672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1735152 
End bp1736666 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content72% 
IMG OID638014834 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_621438 
Protein GI107023111 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA CGCTCACCCG GCGACTGTCG CTCGTGTTCT CGATCCTGCT GATCGCGTGC 
TCGGGCGCGT CGGCATGGCT GCAGATCCGT GCGAACGACA TGCGCGAGAA GGAGGTCGTG
CAGGCGCTGT CGCGCGACCT GGCCACGAAC ATCGCCAACA GCGCGCCGCT GATGGACGCG
AACGGGCTGC GCCCCGACGC CGTGCGCACG CTGTTCGGTC AGTTGATGGG CGTGAACCCG
AGCGTCGAGG TGTACCTGCT CGACAACGCG GGGCGCATCA AGGGCGACGA TGCGCCGCCG
GGCCACGTGA AGCGCGACCG CGTCGATCTC GCGCCCGTGC AGCGCTTCAT CGCGGGCCAG
CCGCTGCCGA TCCTCGGCGA CGATCCGCGC AGCCCGGACG CGCGCAAGGT GTTCAGCGCC
GCACCGCTGC AGCGCGCGGG GCAGCCGCCG TCGGGCTACA TCTACGTGGT GCTGCTCGGC
GAGGCGCATG ACCGGCTCGC CGCGCGCGTC GACGCCGGCA ACGTGCTGCG CACGACGCTG
TGGTCGATGG CGATCGTCGC GCTGCTCGGT CTGCTCGCGG GCCTCGTCGC ATTCAGCTTC
ATCACGCGCC CGCTGCGCCG GCTGACGGCC GCGATGCGCG CCTTCGACGC GAACGGTGCG
CCCGGCGCGC CGGGTACGCC CGACACGCAG CCGCCGCCGG TGCTGCGCTT GCCGCCGGGC
CAGCGCGGCG ACGATATCGC GGTGCTCGAA TCCGCGTTCG CGCAGATGGC CGACCGGATC
GGCGACCAGT GGCGCGCGCT GACGCGCCAG GACCAGCAGC GGCGCGAACT GATCACGAAC
ATTTCCCATG ACCTGCGTAC GCCGCTCACG TCGCTGCACG GTTATCTGGA GACGCTGTCG
CTGAAGGCCG ACACGCTGGC CGAGCCCGAA CGGCGGCGCT ATCTGTCGAT CGCGCTCGCG
CAGAGCGCGA AGGTCGGGCG GCTCGCGCAG GCGCTGTTCG AGCTCGCGCG GCTCGAATCG
GGCGGCGTGC AGGCCGAGCG CGAGCCGTTC TCGCTCGTCG ATCTCGTGCA GGACGTGTTC
CAGAAATTCG AGCTGGCCGC GCAATCGCGC GGCGTCGCGC TGCATGCGCG GATTCCGCCG
CGCGTGCCGG TGGTGTCGGC CGATCTCGGG ATGATCGAGC GCGTGCTGAC CAACCTGCTC
GACAACGCGC TGCGGCACAC GCCTTCGCAT GGCGAGGTCG AGATCGCGCT GGAGCCGCGG
GGCGAGCGCG TGATCGTGAC CGTGTCGGAT ACCGGCGAGG GGATTCCGGC GGCGCGACGC
GAAGGGCTGT TCCAGCGGCC GCAGCGGCCG ATGGGCGGCG GCACGGTGAC GAGCGGCGGG
CTCGGCCTGT TGATCGTGCA TCGGATGCTC GCGCTCAACG GCAGCGGCAT CCGGCTCGTC
GACCGGCCCG GGCGCGGCGC GGTGTTCGAG TTTGCGCTGC CGGTCGCGTC GCCGGCGGCG
GGCGACGCGC GCTGA
 
Protein sequence
MKLTLTRRLS LVFSILLIAC SGASAWLQIR ANDMREKEVV QALSRDLATN IANSAPLMDA 
NGLRPDAVRT LFGQLMGVNP SVEVYLLDNA GRIKGDDAPP GHVKRDRVDL APVQRFIAGQ
PLPILGDDPR SPDARKVFSA APLQRAGQPP SGYIYVVLLG EAHDRLAARV DAGNVLRTTL
WSMAIVALLG LLAGLVAFSF ITRPLRRLTA AMRAFDANGA PGAPGTPDTQ PPPVLRLPPG
QRGDDIAVLE SAFAQMADRI GDQWRALTRQ DQQRRELITN ISHDLRTPLT SLHGYLETLS
LKADTLAEPE RRRYLSIALA QSAKVGRLAQ ALFELARLES GGVQAEREPF SLVDLVQDVF
QKFELAAQSR GVALHARIPP RVPVVSADLG MIERVLTNLL DNALRHTPSH GEVEIALEPR
GERVIVTVSD TGEGIPAARR EGLFQRPQRP MGGGTVTSGG LGLLIVHRML ALNGSGIRLV
DRPGRGAVFE FALPVASPAA GDAR