Gene Bcen_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1548 
Symbol 
ID4092660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1720991 
End bp1721791 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID638014822 
ProductAraC family transcriptional regulator 
Protein accessionYP_621426 
Protein GI107023099 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.120016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGAC TTGTCGCCAA TCGGACACGC GAGTCCACCC CGCCGTTTGC GCACCTTCGC 
TACGAATCGA CGCCGATGCC CGTGTCGGCG ATGGCGGCCA CGTACGTGCA CGGCACGTCG
ATCGCGCCGC ACCGCCATCG ACGCGCGCAA TTGCTCTACG CGATCGAGGG CGTGATGCAC
GTGGAATCGG AAGGCGCGTC GTGGATCGTG CCGCCGACGC GCGGCGTGTG GCTCGAAGCC
GGCCTCGACC ATACGGTGCA GATGAGCGGC GACGTGCAGA TGCGTACCGT GTTCGTCGAA
CCGGGCGCGG TCGAGCACCT GCCCTCGCGC AGTTGCGTCG TCGAAGTGCA TCCGCTGCTG
CGCGAGCTGA TTCTCGCCGC GGTCGACGTG CCGCTCGATT ACGCGCCGGG CTCGCGCCAC
GATCACCTGA TGCGCCTGCT GCTTGCCGAA GTGACCGTCG CGCCGCTGTT GCCGCTGTAC
CTGCCGTGGC CGCACGATGC GCGCCTGCGG ACGATCTGCG ACACGCTGGT CGCCACGCCC
GACGACCTGC GCACGATCGC CGAGTGGGCC GACCTGCTCG GCCTGTCGGT GCGCACGCTG
CATCGCGCGT TCCGCCGCGA GACGGGGCTC AGCTTCCGCC GCTGGCGCGA GCAGGCGCGG
CTGCTGCTCG CGCTCAAGCG TCTGGCGCAC GGCGAGAAAG TGCTGACCGT CGCGATGGAT
CACGGCTACA GCAGCCAGAG CGCGTTCTCC GCGATGTTCA AGCGGCACTT CGGGATGTCG
CCGTCGGCGT TTTACGCGTA A
 
Protein sequence
MSRLVANRTR ESTPPFAHLR YESTPMPVSA MAATYVHGTS IAPHRHRRAQ LLYAIEGVMH 
VESEGASWIV PPTRGVWLEA GLDHTVQMSG DVQMRTVFVE PGAVEHLPSR SCVVEVHPLL
RELILAAVDV PLDYAPGSRH DHLMRLLLAE VTVAPLLPLY LPWPHDARLR TICDTLVATP
DDLRTIAEWA DLLGLSVRTL HRAFRRETGL SFRRWREQAR LLLALKRLAH GEKVLTVAMD
HGYSSQSAFS AMFKRHFGMS PSAFYA