Gene Bcen_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1543 
Symbol 
ID4092655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1716207 
End bp1716887 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID638014817 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_621421 
Protein GI107023094 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.486801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTTT CCAACGCCCA ACTCGCCCAA ACCATCGATC ACACGCTGCT CGCGCCCGAC 
GCGAGCGACG CGCAGATCCG CGAACTCTGC CGCCAGGCGG CCGAGCATCG CTTTTACTCG
GTCTGCGTGA ATTCGGCGAA CGTGCCGCTC GCCGCGCGCG AGCTGGCCGA AACCGGCGTG
CTCGTCTGCG CCGTGGTCGG CTTTCCGCTC GGCGCGGGGC TGTCCGCCGC GAAGGCATTC
GAAGCCACCG CCGCGATCGC GGCGGGCGCG GGCGAGATCG ACATGGTGAT CAACCTCGGT
GCGCTGAAAA GCGGCCGCGC CGACGACGTG AAGGCCGACA TCGACGCCGT ACATCGCGCT
TGCGGCACGG TGCCGCTCAA GGTGATCCTC GAAACGGGGT TGCTGACCGA CGACGAGAAG
GTGCGCGTGT GCGAGATGTG CCGCGATCTC GGCGTCGCGT TCGTGAAGAC GTCGACCGGC
TTCGGCCATG GCGGCGCGAC GCTCGCCGAT GTCGCGCTGA TGCGCCGGAC GGTCGGGCCG
ACGCTCGGCG TGAAGGCGTC GGGCGGCGTG CGCGACCGCG CGGCCGCGCT CGCGATGCTC
GAAGCCGGCG CGACGCGGCT CGGCACGAGC TCGGGGGTGG CGATCGTGAC CGATCAGGGC
GGCGGCGCGG CGGGGTACTG A
 
Protein sequence
MPLSNAQLAQ TIDHTLLAPD ASDAQIRELC RQAAEHRFYS VCVNSANVPL AARELAETGV 
LVCAVVGFPL GAGLSAAKAF EATAAIAAGA GEIDMVINLG ALKSGRADDV KADIDAVHRA
CGTVPLKVIL ETGLLTDDEK VRVCEMCRDL GVAFVKTSTG FGHGGATLAD VALMRRTVGP
TLGVKASGGV RDRAAALAML EAGATRLGTS SGVAIVTDQG GGAAGY