Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1542 |
Symbol | |
ID | 4092654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1715290 |
End bp | 1716060 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638014816 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_621420 |
Protein GI | 107023093 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.287434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA AGAAGGGCGA ACGGATCAAG ACATTGATGA ACGTGCTGCA AGGGCAGAAC GCGATTCATC TGAGGGAAGT CGCCGAGTTG TTCGGCGTAT CCGAAATGAC GATCCGCCGC GATCTCGCGG ACAATCCGCA CGGCCTCAGC CTGATCGGCG GCTACGTGAC GCGCCATTTC GCCGCGCAGC GCAGCGACAT CGGCGAATAC CTGATCAGCG CCGAGAACAA CCGGCAGACC GAGGAAAAGC GCCGCATCGG CAAGCTGGCC GCGCAGTTCG TGACGACCGG CGACACGATC TTCGTCGACT GCGGGTCGAC CACGCCGTTC ATCGTCGATT TCATCCCCGA CGACCTCGAA TTCACGGCGG TCTGCAATTC GCTGAACGTG TTCGCGAAGC TGCAGCAAAA GCCGCATTGC AACGTGATCC TGTGCGGCGG CGCGTATCAC CGCCAGAACA TGGTGTTCGA ATCGGTCGCC GAAACGGGCA TCCTCGATTC GGTGCGCGTG TCGAAGGCGT TCATCTCGGC GGCCGGCGTG AGCGAACGCT GCGGCGTCAC GTGCTTCAAT TTCCACGAAG TCGATGCGAA GAAGAAGGTG ATGGCGCGCG CGCAGAACCG CTTTCTGCTG GTCGACCACA CGAAATTCGA CGAGGTGCGC GCGGCCTATT TCGCCGAACT GACCGATTTC AACTACGTGA TCTCCGACGG GCAACTGAGC CGCCGCTACG AAACGACGAT CCGCGAGCAC GGGATCGCGC TCGTGACCTG A
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Protein sequence | METKKGERIK TLMNVLQGQN AIHLREVAEL FGVSEMTIRR DLADNPHGLS LIGGYVTRHF AAQRSDIGEY LISAENNRQT EEKRRIGKLA AQFVTTGDTI FVDCGSTTPF IVDFIPDDLE FTAVCNSLNV FAKLQQKPHC NVILCGGAYH RQNMVFESVA ETGILDSVRV SKAFISAAGV SERCGVTCFN FHEVDAKKKV MARAQNRFLL VDHTKFDEVR AAYFAELTDF NYVISDGQLS RRYETTIREH GIALVT
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