Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1535 |
Symbol | |
ID | 4092647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1707879 |
End bp | 1709156 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638014809 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_621413 |
Protein GI | 107023086 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCGC TCGCCCCGCA CGCAGCACGG CTGCTGATCG TCGCCGACGA CCTGTCGGGC GCGGCCGACT GCGCGGTTGC CGGGTTGCGT CACGGCCTGA CGGCCATGGT CGTGCTCGAT GCCGCGCACG CGGCGGCGGC GCCACATGGG GTCGACATTC TGTCGATCGA CGTGGATTCG CGCCGCTTGC CGAAGGACGT GGCCGCGCGA CGCACCGTCG ATGCGGTCGC GTCGTTGTCG AATGCCGGCA CGCGCCTCTA CAAGAAGGTG GACTCGACGC TGCGCGGCAA CTTCGCGGCG GAAGTCGCCG CGCTGACGTC GCGCGCCGGA ATGGCGATCG TGTGCCCGGC CTACCCGGCC TCGGGACGCA CGACCATCGA CGGCCGCCAA TGGGTGCGCG GCGTGCCCGT GGAAGCGAGC GAATACTGGC GCAACGAACA CATCCCGGGC ACGGCAGATC TCGTTGCATT GCTGTCCGCC GAAGACCTGC GTGTCGCCTA CACGGCAATC GGTACGGTGC GCGACAACGC AAACGCGCTC ACCGCGCATC TGCGCGAGCT GCAATCCGAC CGCGTGCAAG CCGTCGTGTG CGACGCGGAA TCCGACGACG ACCTGCAACG CATCGCGCGT GCATCCGCGG CGCTCGACGG CGTGTTCTGG GTCGGCTCGG CCGGCCTGGC CCCCGGCGTC ATCGAAGCGC TGGGGCCACC GCATGGCGCG AGCGGGCCGA CGGCCGGCGG CCCGCATTCG AAAGGCCCCG TGCTGACGGT CGTAGGCAGC ATGTCGAGCA TTTCGCATGC GCAGCTGGAC TGCCTCAAGG CGAACGCGGG CACCCATCTC GTTGCGCTCG AAGTCAGCGT CTGCGCGCTG GACGACACGC GAAGCGACGT CACGACCGTG GCAAGCGACG CGCTGCGTGG CGGCCGGCAT GTCGTCGTCT CGTTGAGCCA GGCACGGCGC GGCGACGTCA ATGACGGGCT GCTGTTCTCC ACGCGCCTCG CCGCGCTGCT CGCGCCAGCC GTGCGCCACG CCGGCGCAAT CATCGCGACC GGCGGCGAAA CGGCACGCGC GCTGCTCACC GCGGCCGGCG CGAGCGCGCT GCGTGTCGTC GACGAAATCG AGGACGGCAT GCCGCTGCTC GAATGCCGGC TGCACGGCAA CGCACTGCCC GTCGTGACCA AGGCCGGCGG TTTCGGCCAG CCCGAATCGA TTTATCACGC CTGGCGCCGG CTTGCGAACA CAGGCGAGCC GGCCGACACG GCCCAACCCA ATCAGTGA
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Protein sequence | MNALAPHAAR LLIVADDLSG AADCAVAGLR HGLTAMVVLD AAHAAAAPHG VDILSIDVDS RRLPKDVAAR RTVDAVASLS NAGTRLYKKV DSTLRGNFAA EVAALTSRAG MAIVCPAYPA SGRTTIDGRQ WVRGVPVEAS EYWRNEHIPG TADLVALLSA EDLRVAYTAI GTVRDNANAL TAHLRELQSD RVQAVVCDAE SDDDLQRIAR ASAALDGVFW VGSAGLAPGV IEALGPPHGA SGPTAGGPHS KGPVLTVVGS MSSISHAQLD CLKANAGTHL VALEVSVCAL DDTRSDVTTV ASDALRGGRH VVVSLSQARR GDVNDGLLFS TRLAALLAPA VRHAGAIIAT GGETARALLT AAGASALRVV DEIEDGMPLL ECRLHGNALP VVTKAGGFGQ PESIYHAWRR LANTGEPADT AQPNQ
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