| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1503 |
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| Symbol | |
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| ID | 4092019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1668848 |
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| End bp | 1670392 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638014778 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_621382 |
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| Protein GI | 107023055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.274386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTTC CTCATCCGCT CCCGTTCGCT CGCCGCATCG TCGCCCTCGG CGCCGTCGCC
GCACTGACCG CGTGCTCGAC GCTGCCGCCC TATTCGCCGC CCGCCGTCGC GGTGCCCGCG
CACTACGCGG GCGCACCGGC AGTACCGGCC GCGCAAGCCG GCTGGCACGT CGCGATGCCA
GCCGACGCCG CCGCGCGCGG CGCATGGTGG ACCGTGTTCG GCGACGCCGA TCTGAACGCG
CTCGAAGCGC GCGTCGACGT GTCGAACCAG ACGGTGAAGA AAGCCGTCGC CGACCTGCAA
CAGGCCCGCG CGATGGTCGA CTATCAGCAC GCCGGGTTCC TGCCGACGAT CACGGCAGGC
GCCGCGCAGA GCCGGGCGCG CGTGTCGCAG AACCGGCTCG GTTCGTCGCT CGCCGGCAAG
ACGACGCCCG ACTACCAGGC GGGCGTGGCC GCGAGCTGGG AGCCCGACCT GTTCGGCCGC
GTGCGCGACG CGGTAACGGG CGCCCAGGCG AACGCCGCCG CGAGCGCGGC CGACCTGCAG
GCCGTGAAGC TGTCGGTCAC GGCCGAACTC GCGACCGACT ATTTCGCGCT GCGCTCGCTC
GACACGCAGA AGCAGTTGCT CGACGACTCG GTACGCGCGT ACGCCGACGC ACTGACGCTG
CTCGAGCAGC AACTCGCCGC CGGTGCGATC GACGCGTCGG CGGTGGCGCA AGCCGAGACC
CAGCTCGAAT CGACGCGCAC GCAGGACACC GACATCGATG CGTCGCGTGC GCAGTTGCAG
CACGCGATCG CGACGCTCGT CGGCGAGAGC GCATCGACGT TCGCGCTGCC GCCGCGCGTG
CAGGCGTTCC ACGTGCCGGC CATTCCGGCC GGCGTGCCGT CGCAACTGCT GGAGCGCCGA
CCCGACATCG CGGCGGCCGA GCGTCGCGTG GCGGCCGCGA ACGCGCAGAT CGGCGAAGCG
CGCGCCGCGT TCTTCCCGGA TCTCGTGCTG TCGGCGAGCG CCGGCCTCGA AAGTTCGTTC
TTCGCGCCGT GGCTCGCCGC GCCGAGCCTG TTCTGGTCGC TCGGCCCGCA ACTCGCCGGC
ACGCTGTTCG ACGGCGGCCG CCGCAGCGCG TCGCTGCGCG GCGCGCATGC GCAATACGAC
GGCGCGGTCG CCGATTACCG GCAAACCGTG CTCGTCGCGT TCCAGCAGGT CGAGGATCAG
TTGTCCGCGC TCGATGCACT CGCGTCCGAA GCCGGCAGCC AGCAGCGCGC GACCGACGCG
GCCGACCTGT CACTGCGGCT GACGACGAAT CGCTTCAACG CCGGCGCCGT CAGCTATCTG
GACGTGGTGA CCGCGCAGAC GATCGCGCTG ACGAACCGGC GCACCGCCGA TCAGATCGAC
GCGCGCCGGA TCGAGGCCGA AGTCGCGCTG CTGAAGGCGT TGGGCGGCGG CTGGCAGGCG
AGCGCGAGCG CCGGGGCAGA CGCGGAATCG AACACCGGCA AGAAGGACGC CGCGGCAACC
GCGCGGCCCC AACCCGCCGC CGTCAAGCAA CAGGCGGCCG GTTGA
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| Protein sequence | MRLPHPLPFA RRIVALGAVA ALTACSTLPP YSPPAVAVPA HYAGAPAVPA AQAGWHVAMP
ADAAARGAWW TVFGDADLNA LEARVDVSNQ TVKKAVADLQ QARAMVDYQH AGFLPTITAG
AAQSRARVSQ NRLGSSLAGK TTPDYQAGVA ASWEPDLFGR VRDAVTGAQA NAAASAADLQ
AVKLSVTAEL ATDYFALRSL DTQKQLLDDS VRAYADALTL LEQQLAAGAI DASAVAQAET
QLESTRTQDT DIDASRAQLQ HAIATLVGES ASTFALPPRV QAFHVPAIPA GVPSQLLERR
PDIAAAERRV AAANAQIGEA RAAFFPDLVL SASAGLESSF FAPWLAAPSL FWSLGPQLAG
TLFDGGRRSA SLRGAHAQYD GAVADYRQTV LVAFQQVEDQ LSALDALASE AGSQQRATDA
ADLSLRLTTN RFNAGAVSYL DVVTAQTIAL TNRRTADQID ARRIEAEVAL LKALGGGWQA
SASAGADAES NTGKKDAAAT ARPQPAAVKQ QAAG
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