Gene Bcen_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1498 
Symbol 
ID4092014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1660634 
End bp1661377 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID638014773 
Productextracellular solute-binding protein 
Protein accessionYP_621377 
Protein GI107023050 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGCGC TGTTCGCCGC CGCGCCGGCC CATGCCGATG CGCTCGACAC CATCGCGAAA 
AACGGCACGC TGCGCGTCGC GGTGCCCGAG GACTATCCGC CGTTCGGTTC GGTCGGCACG
GACATGCAGC CGCAGGGCTA CGACATCGAC ATGGCAGGAC TCCTTGCCAA GTCGCTCGGC
GTCAAGCTGA AGCTGGTGCC CGTGAACAGC GCGAACCGGA TTCCGTACCT GACGACCAAC
AAGGTCGACA TGGTGATCTC GTCGCTCGGC AAGACGCCGG AACGCGAGAA GGTCATCGAC
TTTTCGAGCG CGTATGCACC GTATTTCCAG GGCGTGTTCG GGCCGTCCGA CGTGAAAGTG
AGCACGCCGG CCGACCTCAC CGGCAAGACG GTCGGCGCCA CGCGCGGCGC GCTCGAGGAG
ATCGCGCTGT CGCAGCTCGC GCCGAACGCG ACGATCAAGC GCTTCGAGGA CAACAACGCG
ACGATCCAGG CGTTCCTGTC GGGGCAGGTC CAGTTGATCG CGGCCGGCAA CATCGTCGCG
GCGGCGATTC TCGCGAAGAA TCCGCCGCGC CGCCCCGAGG TGAAGTTCGT GATCAAGAAT
TCGCCGTGCT TCGTCGGCGT CAACAAGAAC GAACCGCGCC TGCTCGCGAA GATCGACGAT
GCGATCGCGC ATGCGAAGCA GGACGGCTCG CTGGGCGAGA TGTCGCGCAA GTGGCTCGGC
CAGCCGTTGC CGGCCGGACT GTGA
 
Protein sequence
MIALFAAAPA HADALDTIAK NGTLRVAVPE DYPPFGSVGT DMQPQGYDID MAGLLAKSLG 
VKLKLVPVNS ANRIPYLTTN KVDMVISSLG KTPEREKVID FSSAYAPYFQ GVFGPSDVKV
STPADLTGKT VGATRGALEE IALSQLAPNA TIKRFEDNNA TIQAFLSGQV QLIAAGNIVA
AAILAKNPPR RPEVKFVIKN SPCFVGVNKN EPRLLAKIDD AIAHAKQDGS LGEMSRKWLG
QPLPAGL