Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1496 |
Symbol | |
ID | 4092012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1659211 |
End bp | 1659861 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638014771 |
Product | amino acid ABC transporter permease |
Protein accession | YP_621375 |
Protein GI | 107023048 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT TCACATTGGG GCAGATTCTC GCGAACCTGC TGCTGGCCGC GCGCTGGACG ATCGTGCTGT CGATCGTGTC GTTCGTGACG GGCGGCCTCG TCGGCCTCGG GCTGCTCGTG ATGCGCGTGT CGGGCTCGAC GGTGCTGCGC GGCATCGCGA AGCTCTATAT CGAAGTGTTC CAGGGCACCC CGTTGCTGAT GCAGCTGTTC ATCGTGTTCT TCGGCCTGCC GCTCGTCGGG CTCGACGTGC CGCCGTGGGT CGCGGCCACG GCGGGGCTCA CGTTCTTCAC CAGCGCGTAT CTGGCCGAGA TCTGGCGCGG CTGTGTCGAG GCCGTGCCGA AAGGGCAGTG GGAGGCGTCG GCCAGCCTGG CGATGAGCTA CGTCGAGCAA TTGCGTCACG TGATCCTGCC GCAGGCCGCG CGCATCGCGA TCGCGCCGAC GGTCGGTTTC GGCGTGCAGG CCGTGAAGGA TACGGCGCTG GTGTCGATCA TCGGCTTCAC CGAGCTGACG AAGGTCGGCA TCGCGATCTC GAACGCGACG TTCCGGCCGT TCGTCGTGTA TGGCCTCGTC GCGCTGATCT ATTTCGCGCT CTGTTATCCG CTTACCCGTT ATGCGCGCAC GTTGCAAAGG AGATGGCATG CCGCTCGTTG A
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Protein sequence | MTDFTLGQIL ANLLLAARWT IVLSIVSFVT GGLVGLGLLV MRVSGSTVLR GIAKLYIEVF QGTPLLMQLF IVFFGLPLVG LDVPPWVAAT AGLTFFTSAY LAEIWRGCVE AVPKGQWEAS ASLAMSYVEQ LRHVILPQAA RIAIAPTVGF GVQAVKDTAL VSIIGFTELT KVGIAISNAT FRPFVVYGLV ALIYFALCYP LTRYARTLQR RWHAAR
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