| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1489 |
|---|
| Symbol | |
|---|
| ID | 4092005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1653444 |
|---|
| End bp | 1654352 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638014764 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_621368 |
|---|
| Protein GI | 107023041 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT CTTTCGAAGC ACTCGAGGCA CTGGACGCGA TCGACCGCAC CGGTACGTTT
GCCGACGCGG CGGAGTTGGT GCACCGCGTG CCGTCCGCAC TGACCTATCT CGTACAAAAG
CTCGAGAGCG ATCTCGACGT CGCGTTGTTC GATCGCAGCG GGCGTCGGGC GAAGCTCACG
CGCGCGGGCC GCGTCGTCGT CGAGGAAGGC CGTCGTCTGC TTCATGCCGC CGAGCAACTT
GAACGAAAAG CGCAGCGCGC GCAGCAAGGT TGGGAAACCG AAGTCCGCGT CTGCATCGCC
GAGATACTGC CCTTCGACAT GATGTGGCCA TACGTCCACG CGTTCTACGC ACTTGAAATG
GACACGCGAC TGCGACTCTC CACCGAAGTG CTCGGCGGCA CCTGGGATGC GCTGATCTCG
CGGCGGGCCG ATCTGATCGT CGGCGCGGCG GGCGAGCCGC CGGAACTGCC GGATATCGTG
GCGCAGCCCA TTGGCACGCT CCGGCACGTA TTCGCGGTCG CTCCGACCCA TCCGCTCGCT
GCGCTGCCCG AACCGCTGTC GATGGCGTCG ATCGTCGAGT ATCGCGGCGC GGTGATCTCC
GACACGTCCC GCGAGCTTCA GCCGCAGTCG GTCGCGACTG ATGCCGGCCA ACCGTATCTC
GCGGTGCCGA CGCTCGCGGC GAAACTGGCC GCGCAATGCG AAGGACTCGC GGTAGGCACG
CTCCCGGACT GCATCGCGGC ACCCGCGATC GCGCAAGGCA GGCTGGTCGC GCGGGAAGTC
ACCGGCATGC GCGACACGAC CCATTGCTAT ATCGCGTGGC GCACCGACGA AGCCGGGCGC
GCGCTCCGCT GGTGGGTCGA ACAGCTCGGT CACCACGACC TCGTCGATCG GTTCACCGCG
CTCGTGTGA
|
|---|
| Protein sequence | MKLSFEALEA LDAIDRTGTF ADAAELVHRV PSALTYLVQK LESDLDVALF DRSGRRAKLT
RAGRVVVEEG RRLLHAAEQL ERKAQRAQQG WETEVRVCIA EILPFDMMWP YVHAFYALEM
DTRLRLSTEV LGGTWDALIS RRADLIVGAA GEPPELPDIV AQPIGTLRHV FAVAPTHPLA
ALPEPLSMAS IVEYRGAVIS DTSRELQPQS VATDAGQPYL AVPTLAAKLA AQCEGLAVGT
LPDCIAAPAI AQGRLVAREV TGMRDTTHCY IAWRTDEAGR ALRWWVEQLG HHDLVDRFTA
LV
|
|---|
| |