Gene Bcen_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1487 
Symbol 
ID4092003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1652014 
End bp1652700 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID638014762 
Productisochorismatase hydrolase 
Protein accessionYP_621366 
Protein GI107023039 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC CCAAGCTTGA AGTACTTACC CCGCACAACA GCCAACTGAT CTTCATCGAT 
CAGCAGCCGC AGATGGCGTT CGGCGTGCAG TCGATCGATC GGCAGACGCT GAAGAACAAC 
GTCGTCGGGC TCGCGAAGGC CGCGAAGGTC TTCAACATCC CCACCACGAT CACGACGGTC 
GAAAGCGAGA GCTTCTCGGG CCACACCTAT CCCGAGCTGC TCGACGTGTT CCCGAACCAG 
AAGACGCTCG AACGCACGTC GATGAACTCG TGGGACGACC AGAAGGTGCG CGACGCGCTC 
GCCGCGAACG GCCGCAAGAA GGTGGTCGTG TCGGGCCTGT GGACCGAAGT CTGCAATACG 
ACGTTCGCGC TCTGCGCGAT GCTCGAAGGC GACTACGAGA TCTACATGGT CTCCGACGCA 
TCGGGCGGCA CGACGCAGGC CGCGCACGAT ATCGCGATGC AGCGCATGGT CCAGGCCGGC 
GTCGTGCCGG TCACGTGGCA GCAGGTCCTG CTCGAATGGC AGCGCGACTG GGCACGCCGC 
GAGACGTATG ACGCGGTGAT GGCGATCGCG AAGGAGCACT CGGGCGCCTA CGGGATGGGC 
GTGGACTATG CGTACACGAT GCTCCACAAG GCACCGCAGC GCACCGCGAC GCCGCACGAG 
TCGATTGCGC CCGTGCCGGC GAAGTAA
 
Protein sequence
MSNPKLEVLT PHNSQLIFID QQPQMAFGVQ SIDRQTLKNN VVGLAKAAKV FNIPTTITTV 
ESESFSGHTY PELLDVFPNQ KTLERTSMNS WDDQKVRDAL AANGRKKVVV SGLWTEVCNT 
TFALCAMLEG DYEIYMVSDA SGGTTQAAHD IAMQRMVQAG VVPVTWQQVL LEWQRDWARR 
ETYDAVMAIA KEHSGAYGMG VDYAYTMLHK APQRTATPHE SIAPVPAK