| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1467 |
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| Symbol | |
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| ID | 4091983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1625575 |
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| End bp | 1626603 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638014742 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_621346 |
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| Protein GI | 107023019 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0027674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAC CCACCCCCGC GCCATCGCCC GCTGCGCCCG CGCGTTCCCG GCGACTGGCC
GTCGTCGCGA TCGCCGTGAT CGCGCTACTG CTGGTCGCAC TGCTCGTGTA CGAGTTCTAC
GCACGCGATC GCGGCACCGA CGACGCGTAC GTGACCGGCC ATCTGCACGT GATCTCGCCG
CGCGTCGCCG GCACGGTCGA GCATGTGCTC GTCGACGACA ACCAGTTCGT GCATGCGGGC
GACGCGCTCG TGCAGATCGA CCGGCGCGAC TTCGACGTGC GCGTCGCGGC GCAGCGCGCC
CGCGTCGCCC AGGCGCATGC CGATGCGAGC CGCGCACGCG CGCTGATCGA GCAGGCGGAC
GCGGCGCTCG TGTCGGCGCA CGCCGATGCC GAAAAGGCCG AACTCGATTA CGCCCGTGCA
CGCGAACTGA CTCGCGAGAC GCCGCGCGGC CTGTCGAAGC AGGAGTTCGA TGCGGCCGAC
GCCGCCCGCA AGTCGGCCCG CGCGCGCGTC GCGGCGGCCG ATGCGCAACG GCGCAGCGCG
CTCGCCGCCG CTCAGGCCGC CGAGGCCGCG TCGAGCCAGA ACGACGCCGA GTTGCGCGAC
GCGCTGCTGC AACTCGGCTA CACGGCGGTC GTCGCGCCGT CGGACGGCTA CGTCGGCAAG
AAGACCGTCG AGACCGGCGA GCATGTCGCG CCCGGCCAGG CGCTGCTCAC GCTGGTCGAG
CCGCATCCGT GGATCGTCGC CAATTTCCGC GAGACGCAGC TACGGCACGT GCGCGCCGGC
GACGCCGTGC AACTGCGCTT CGATGCGCTG CCGGAGCGCG CGTTCAGCGG CCGCATCGAC
AGCCTGTCGC CCGCGACCGG CGCGCAGTTC GCGCTGCTGC CGCCCGACAA CGCGACCGGC
AATTTCACGA AGGTCACGCA GCGCGTGCCC GTGAAGATCC TGCTCGACGG CCCCGCCGCG
ACGGAGCCGC GCATCCGGCC CGGGCTGTCG GTCGTCGTCA CACTGCAACC CGGCAGCGAA
TCGCGATGA
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| Protein sequence | MTPPTPAPSP AAPARSRRLA VVAIAVIALL LVALLVYEFY ARDRGTDDAY VTGHLHVISP
RVAGTVEHVL VDDNQFVHAG DALVQIDRRD FDVRVAAQRA RVAQAHADAS RARALIEQAD
AALVSAHADA EKAELDYARA RELTRETPRG LSKQEFDAAD AARKSARARV AAADAQRRSA
LAAAQAAEAA SSQNDAELRD ALLQLGYTAV VAPSDGYVGK KTVETGEHVA PGQALLTLVE
PHPWIVANFR ETQLRHVRAG DAVQLRFDAL PERAFSGRID SLSPATGAQF ALLPPDNATG
NFTKVTQRVP VKILLDGPAA TEPRIRPGLS VVVTLQPGSE SR
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