Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1438 |
Symbol | |
ID | 4093492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1593434 |
End bp | 1595170 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638014713 |
Product | phage integrase |
Protein accession | YP_621317 |
Protein GI | 107022990 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGC GCCTCGCTTC ACCGCCTTCC TCCGATTCCG CGCCTGCGCC CGCAGGCTTT CCCGACGCCG ACGAACTGGC CGCGCTGCGT GCGTGGTACG CGGGCATGAC CGTGCGCCAG GCCGTCGAAC GCTACCTGCC CGACCGGCTC GGCGGCGGGC GGTCGGCACG CGGCGTGATC GGCGCGATTC GCCGTCGCCT CGTGCGCGTC GCGCGGCAGG TCGGTCGCCC CGACCTCGCG GAACGGCTCG GCCACGCGGA CGGTGAGCGT TTGCGGGAGG CGAAGGTGGC CACCGACGCG ATCGGCCTGC TGCGCCATGC GCGCGCGCCG GTCCCGCAGA TCAGCGACGA CGTCGGCCTG TGGCTGCCGG CACGCGCGGT CGTGGCATTG CGTGCGCACG GGATCGCGAC GCTCGCCGAC CTGACGGTGC GGATTCCGCG CCGGCGCCAG TGGTGGCGCG CGATCGCGGG CCTCGGCATG GCCAGCGCGC GGCGCGTCGA GGCATTCTTC GCCGCGCATC CGGACCTGAC CGAACGGGCG CGCGCGCTGA TCGCCGCGAC GCCGCGCGGC AGCATCGTGC CGTGGGAGCA CCTGAAGCTG CCGCACGAAG TCGACGGCTC GGCCGGCACG TTCCGCGCGC CGCGCGCGAC CAGCACGCTC GACGCGGACA ACGATTACGC GGCCGTGCAC GCGTGGCTGT CGCTGCACGA ATCGGCCGCG ACGCGGCGCG CATACCGCAA GGAGGCCGAG CGGCTGATCC TGTGGGCGAT CGTCGAGCGC GGCCGCGCGC TGTCGTCGCT GACCACCGAG GATGCGCTCG CGTATCGCGC GTTCATCCGC CGCCCGACGC CGCACGAACG CTGGGTCGGG CCCGTGCGGC CGCGCGGTGC GCCCGACTGG CGGCCGTTCT CCGGGGCGTT GTCCGCGCGG TCGGCGGCAT ACACGCTGTC GGTGCTCGGC GCGCTGTTCC GCTGGCTGAT CGAGCAGCGC TATCTGCTCG CGAATCCGTT CGCGGGCGTG AAGGTGCGCG ACACGCGCGG CGCGACCGCG CTCGACACGT CGCACGCGTT CACCGAAGGC GAGTGGCTGC TGGTCCGCAC GATCGCCGAC GGGCTCGAGT TCGGCAAGCG CACGGCCGAC GGCGCGCCGC AGCCGGGCTG GACGCCGGCC GCCGCGCAAC GGCTGCGCTT CATTCTCGAT TTCGGCTATG CGACCGGGTT GCGCGCGAGC GAACTGGTCG GCGCGACGCT CGGCGACATC GAGACGGATG CGCACGGCGA CGCATGGCTG AAGGTGATCG GCAAGGGCAG CAAGGCGGCC CGCGTCGCGC TGCCGCCGCT GGCGCGCACG GCGCTCGATC GCTATCTGGT CGCGCGCCGG TTGCCGGTCA CGCCGGCGCG CTGGCGGCCC GATACGCCGC TGATTCCGCG CCTCGCGGAA GACGACGCGG CCGCGATCAC GAGCGTGCGG CTGTGGAAGG TGATGCAGCG TTTCTTCGCG CAGACGGCCG ACGCCGTCGA AGCCGACCAT CCGGCGCTCG CGCACAAGCT GCGCCAGGCG AGCCCGCACT GGATGCGGCA TACGCATGCG ACCCACGCGC TGGCGCGCGG CGCGGAGCTG ACGACGGTGC GCGACAACCT GCGGCATGCA TCGATCTCGA CGACGTCGAT CTATCTGCAT GGCGACGACG TGAAGCGGGC GCGGCAGATG TCGAGCGCGT TCGGTATCGA CAAATGA
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Protein sequence | MKPRLASPPS SDSAPAPAGF PDADELAALR AWYAGMTVRQ AVERYLPDRL GGGRSARGVI GAIRRRLVRV ARQVGRPDLA ERLGHADGER LREAKVATDA IGLLRHARAP VPQISDDVGL WLPARAVVAL RAHGIATLAD LTVRIPRRRQ WWRAIAGLGM ASARRVEAFF AAHPDLTERA RALIAATPRG SIVPWEHLKL PHEVDGSAGT FRAPRATSTL DADNDYAAVH AWLSLHESAA TRRAYRKEAE RLILWAIVER GRALSSLTTE DALAYRAFIR RPTPHERWVG PVRPRGAPDW RPFSGALSAR SAAYTLSVLG ALFRWLIEQR YLLANPFAGV KVRDTRGATA LDTSHAFTEG EWLLVRTIAD GLEFGKRTAD GAPQPGWTPA AAQRLRFILD FGYATGLRAS ELVGATLGDI ETDAHGDAWL KVIGKGSKAA RVALPPLART ALDRYLVARR LPVTPARWRP DTPLIPRLAE DDAAAITSVR LWKVMQRFFA QTADAVEADH PALAHKLRQA SPHWMRHTHA THALARGAEL TTVRDNLRHA SISTTSIYLH GDDVKRARQM SSAFGIDK
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