| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1431 |
|---|
| Symbol | |
|---|
| ID | 4093485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1584410 |
|---|
| End bp | 1585330 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638014706 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_621310 |
|---|
| Protein GI | 107022983 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.53118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAC AACTTCCACC GCTGCTCTCC GTCCGCGCAT TCGAGGCGGC CGCGCGCCAT
GGCGGCTTCG CCCGGGCAGG TGACGAGCTG TGCGTCACGT CCGGTGCGGT GGGCCATCAG
GTGCGGCTGC TGGAGGAGTG GCTGGGCACG CCGTTGTTCA TGCGTGGCGC CCGGTCGGTC
CAGTTGACGG AGATCGGGCG GCGCTACTTC CTGGAAATCG AACGCTTGAT GGACGAGCTC
GAGCGCGCGT CGCTCGACAT CCGGCAAGCC GCGGATTCGC CGGAGGTCAC GGTCACCGCG
ATGCCGTCGT TCGTCACGCG TTGGCTGATG CCGCGCCTGG GCGAGTTCCG GCGGCTGCAT
CCCGACATCG AGGTGCGCCT GCTGGCTTCG GTGCCCGCCG TCGACTTCAG CCGCGAGCGC
GTCGACGTGG CGATCCGCCT GGGTGTGGGC CCCTATCCGG GGCTCATCGC GGAAAAACTG
ATGTCGGAGA CGTTCCTCGC GGTCGGGCAA CCGTCGATAT GCAAGCCGTT GCGCACCGTG
GACGATCTGT TGCGTGCAAC GCTGTTGCAC GACGAATACG AGGCTCGCAT TCCGGAGCAG
GTGGACTGGA TGCGCTGGAG CCGGATGCAG GACGTGCAGG CCGGCCCGGC GCGTTTGCGG
CAAGGGCCGA GCTTCTCGCA TACCTATCTG ACGCTCGATG CCGCGATAGC GGGCCAGGGC
GTGGCCGTGG CGTCGGACGT CCTCGCCGCC GATGCGGTCA GGCAAGGGCT GCTGGCCATT
GCGCCGGGCA AGCCGGTGCA AGGCCCCTAC AGCTACCATC TGTTGACGAC GCGCGCGGCC
GCCGCGCGGC CGCAAATCGA TGCGTTCTGC AGTTGGCTGC GATCGGCCGC ACGGTCGTTT
TCGGCGGCCG GCTGGGCTTG A
|
|---|
| Protein sequence | MSRQLPPLLS VRAFEAAARH GGFARAGDEL CVTSGAVGHQ VRLLEEWLGT PLFMRGARSV
QLTEIGRRYF LEIERLMDEL ERASLDIRQA ADSPEVTVTA MPSFVTRWLM PRLGEFRRLH
PDIEVRLLAS VPAVDFSRER VDVAIRLGVG PYPGLIAEKL MSETFLAVGQ PSICKPLRTV
DDLLRATLLH DEYEARIPEQ VDWMRWSRMQ DVQAGPARLR QGPSFSHTYL TLDAAIAGQG
VAVASDVLAA DAVRQGLLAI APGKPVQGPY SYHLLTTRAA AARPQIDAFC SWLRSAARSF
SAAGWA
|
|---|
| |