| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1411 |
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| Symbol | |
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| ID | 4091811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1554994 |
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| End bp | 1557864 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638014686 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_621290 |
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| Protein GI | 107022963 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCG CCTTCGTTGG CGCGCTCGAT CAGAACAATC GTGCGATCCG GTTTCATTGG
GGCCGTCATC AGGATGCGCT GGCGCATGTC CTGGTGCCAC AGAGCATCGA TTTGACGGAA
GGTCTCTGTG TCGGCATCGA AGGGCACCTG ACCTGCCTGT CGTCACGCCC GGATCTGCCG
CTCTCCGCCT TTCTGGGGTT GCCGCTTTCG GTGCAACTGA TGACGGATCG AGGCAAGCCA
TATCCGATCA ATGGGATCAT CACAGATGTC CGCGCCGGTC AATCGGACGG CTCCCTCACG
TGCGTACAAC TGACATTGAG AGATGCGCTG AGTATTCTCG ATCAGCGGAT CAACAGCAGA
ACGTTCCGTT CGATGAGTGT TCCGGACATT CTGGAGACAC TGCTGCACGA ATGGCAGCAA
CGCAGTTCCG CGTTGGCGCA GGCTTTCGAT TTCGAGCTCG TGCTGGATCG CAACCAGTAT
CCAAAGCGCG AGCAGACGCG CCAGGCGGGT GAATCGGATG CGGCCTTCAT TCGACGGATG
TGTCGACGCG ACGGTATTTT CTGGTACACC CGGGCTGGCA AGCATGATGG TGCGGCCGCC
GACACGCCGG TCCATACGCT CGTGTTCTGC GACGATCCGA CGAAGCTGCC ACAGGCGGCG
GCAGGCCATG TGCCTTACCA CCGGGGTACG CAGTCGCGGG AGCGTGACTC GGTCACGCTA
TGGTCCGCGG CCCGTGCGTT GACGCCCGGA AGTGTGCGGC GTGCCAGTTG GGATTACAAG
ACCGGCAGGA TCGCGCAGTC TGAGCAGGAG ACGATCGTCG ATCAGGGCGA GGCGGGCAAC
GATCTTGCGA AGCTGCTGGC CGACTCGGTC ATCGACGTTC CGCATGCGGC GGACTCGGAT
GCCGACCACG AGCGTTTGGC GAAGGCTCGG ATTCTGGCAC ATGAGCATCG CGCCGAATGC
GTGCATGCGT CGAGCGATGT CCGGGATGTC TCGCCGGGCT TCTGGTTCAC GCTGGCTGGG
CATCCGGAGG TCGATACCCG GCCCGAGGAG CAGCGGCAGT TCGTCGTTAC CAGCTTGCAC
CACCGGGCGA CCAACAATTT TTCGAAGGCG CTCGACGAGC GGGCCCAAGT GCTGTTTGCC
GCGAGTCGCT GGAGTTTCGA CGCGTTGCCG GTCGAAGAGG GGGCCGGGGT TCGCTACGAG
AACACATTCG TTTGCGTGCG CCGCGGTGTG CCGCTGACAC CTGCCTACGA TCCGCGCGTC
GATTTGCCGC CCGTGCATCC GTTTACCGCG AAAGTGGTTG GCCAGGACGG CGAGGAAGTG
CACTGCGACG AATTGGGGCG CATCAAGGTG CAGATTCTTG GTCTGCGCGC CGACGATCAT
GCCCATGCGC AAGGTGCCGG CACCAGCGGA ACCGAGCGGG ACAGCGCGTG GGTGAGATGG
GTCAGCCCCT GGGCCGGGCC GAACTACGGC ATGGACATGC TGCCGCGCGC GGGAATGGAA
GTGCTGATCG ACCATTTACA CGGTGACCCC GACAAGATGG TCGTGATCGG GGTGCTGCAC
GGTGGTCCCA ACATGCCGAC CACGTTCAGC CATACCGGCT CGCTTCCGGG CAATCGATAT
CTTTCCGGCA TCAAGACCAA GGAGGTCAAG GCGGATCGCT ACAACCAGTT GCGTTTCGAC
GATACACCCG GCCAGATCAG TAGCCAGCTT GCCAGCGAAC ACACCTATAC CCAGCTGAAC
CTGGGCTACC TGACGGAACC TCGTAACGAT GGCAAGGGCG CGCCTCGTGG CGACGGTTTG
GAGGCCAGAA CCGATGCCCA GGCGGTCATT CGCGCCGCGA AGGGCGTCTA CGTGACCGCG
CAGCAGCAGG GGCGTGCCGA AGGCAAGATG CTCGAACGCA CGGCGTTGCA GACGTTGATC
GAACAATTGC AGGAACTGGT ACGAAACCTC GGTGATGCGT CCGCCGCGAA CGACGCCGAC
AACACCGACC TCGCACGCAT CGAGAAGATC ACATCGCAGA TCAAGGGCTG GGATGCTGGC
AGCAACGTTG ATCAGGGTGG CGGCGGCTCC GGCGGTGCGC CGATGGTGGC AATCGAGGGG
CCGGCCGGCG TGACCGTGGT TAGCCAGGAC GCGATGGTGC TCGGGGCACA GACCAACATC
GATGCGGTGA GTGCCGGCAA CACGCAGATC AGCGTGGGAC GTCGTCTGTT GATGCGCGTC
GGCGATTGGA TGAGTGCTTT CGCGGCCAAG GGCATGACGC TGGTGACGGC AGACGGGAAG
CTGCGTATCG AGGCGCACAA GGAGGACGTG GTTGTGAAGG CCGCCAAGCG CATCATCCTG
GAGGCAGGCG AAGAGATCGT GTTCCGCTCG CCGAAGGTCA ATACGCAGGC GAGCGACGAA
GCGTCGATCA ACGGCGGGTC GAGCTACAGC CAGTGGAATG GCGGCGGCGT CGTGCATGGC
ACGAGCGGCG TATGGCGCGA ACACGCGGCG TCGCACAGTC TCGTCGGGCC GGACAACAAG
CCTGTGAAAG CGCCCGACCC CCTGACGTTC AAGGAGCTGG AGCAACAAGA CAGCTTCGCG
GTGGTGCTCC GTTCCCATCC CAGCGACGGG CGGCCGCTTG CTTACGAGCC GTACACCCTT
TACAAGGGAG CGGCCAAGAT TGCGGACGGC GTGACCGACG AGCATGGTCA ACTGATCATT
GCGAATCACC AGAAGGGCAC GTCTTCCTAT ACGGTCAAGC TGCACAACGG GCACGAGATC
GAGGTGCCCG TGATGGAGGG AGGGTTGAGC GACGATGATC AACTGGCCGC GCAGGGATGG
CGGGCAGTCG ACGGCGATCC GGAATCGCGC CAGCGCCACG CACAGGGCTG A
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| Protein sequence | MLRAFVGALD QNNRAIRFHW GRHQDALAHV LVPQSIDLTE GLCVGIEGHL TCLSSRPDLP
LSAFLGLPLS VQLMTDRGKP YPINGIITDV RAGQSDGSLT CVQLTLRDAL SILDQRINSR
TFRSMSVPDI LETLLHEWQQ RSSALAQAFD FELVLDRNQY PKREQTRQAG ESDAAFIRRM
CRRDGIFWYT RAGKHDGAAA DTPVHTLVFC DDPTKLPQAA AGHVPYHRGT QSRERDSVTL
WSAARALTPG SVRRASWDYK TGRIAQSEQE TIVDQGEAGN DLAKLLADSV IDVPHAADSD
ADHERLAKAR ILAHEHRAEC VHASSDVRDV SPGFWFTLAG HPEVDTRPEE QRQFVVTSLH
HRATNNFSKA LDERAQVLFA ASRWSFDALP VEEGAGVRYE NTFVCVRRGV PLTPAYDPRV
DLPPVHPFTA KVVGQDGEEV HCDELGRIKV QILGLRADDH AHAQGAGTSG TERDSAWVRW
VSPWAGPNYG MDMLPRAGME VLIDHLHGDP DKMVVIGVLH GGPNMPTTFS HTGSLPGNRY
LSGIKTKEVK ADRYNQLRFD DTPGQISSQL ASEHTYTQLN LGYLTEPRND GKGAPRGDGL
EARTDAQAVI RAAKGVYVTA QQQGRAEGKM LERTALQTLI EQLQELVRNL GDASAANDAD
NTDLARIEKI TSQIKGWDAG SNVDQGGGGS GGAPMVAIEG PAGVTVVSQD AMVLGAQTNI
DAVSAGNTQI SVGRRLLMRV GDWMSAFAAK GMTLVTADGK LRIEAHKEDV VVKAAKRIIL
EAGEEIVFRS PKVNTQASDE ASINGGSSYS QWNGGGVVHG TSGVWREHAA SHSLVGPDNK
PVKAPDPLTF KELEQQDSFA VVLRSHPSDG RPLAYEPYTL YKGAAKIADG VTDEHGQLII
ANHQKGTSSY TVKLHNGHEI EVPVMEGGLS DDDQLAAQGW RAVDGDPESR QRHAQG
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