Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1379 |
Symbol | |
ID | 4091779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1516233 |
End bp | 1517387 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638014654 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_621258 |
Protein GI | 107022931 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.730232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCGA ATCGGTATAA AAGGTATTCT GAGTACGTGA AAGACGACGT GTGCCACGTC CTTTTTTACC TGGTCACGAC ACATTCGGTC AAAACTTCCC AACCCGGTTA TTACTCCATG TCGAAATCCG ACGATGACGG CACGCGACTG TTCGGTCGTT CGCGAACAAT TCAGGATCTG CTGCTGAAAG TGTCGCGCGT CGCCGCCACC CGCGTGAGTG TGCTGGTGGT CGGCGAAAGC GGTGCGGGAA AAGATATCGT CGCCCGGCTC ATTCACGACA TGAGCCCGCG CCGTCGCGGG CCGTTCGTGC CCGTCAATTG CGGCGCGATT CCGAAGGACA TCGCGGAGTC GCAGTTGTTC GGCCACGAAA AAGGCAGCTT CACGGGTGCC GTTGCACAAC ATGTGGGCAT GTTCGAGGCC GCGCGCGGCG GCACGCTGTT TCTCGACGAG ATCGCCGAGA TGCCGCTCGA ATTGCAGGTC AAGCTGCTGC GCACGCTCGA AACCAACACG ATCGTGCGCG TGGGCGGCCA CGAGGCGATT CCGCTCGACG TGCGGATCGT CGCGGCCACC CATCACGACC CGGTCGAGGC CTTGCGCAGC GGCGCGCTGC GCGAAGACCT GTTCTACCGG ATCGCGCCGA TCGCGCTGCA CGTGCCCGCG CTCCGGCAGC GCGAGGACGA CGTCGGCGAT ATCGCACTGC AGATCGTCGA ACGGCTGAAC GCGCGGCACC GCACGCGCAA ACGGCTGTCG ACACAGGCGA TGAAGGCGCT GCGCGCGTAC ACGTGGCCCG GCAATGTGCG CGAACTGCGC AATACGCTGG AGCGCGCGTT CATCCTCGCC GACGAGCAGA TCGAGCTGCA GTTGCCGCGC CGCCCGCCGC CGCGCGAGGA AGTGCGTCAC AACGCGATGA CGCTGCATAT CGGCACGACG CTCGCGCATA CGCAGCAGCG CTTCATCGTC GCGTCGCTAC GGCATTTCAA CGGCGACAAG CCGCGCACCG CCAAGGCGCT CGGCATCAGC CTGAAAACGC TGTACAACCG GCTCGCGCTG CTGCCCGAAA GCGAGCGCAA TGCAGCCAGC GGCAGCGCGC CGCCGGCCGC GAACGCGTCG AACGGCGGCA GCGCCTCCAC TTCGCCGCCC GCGACGATGC CGTAA
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Protein sequence | MSSNRYKRYS EYVKDDVCHV LFYLVTTHSV KTSQPGYYSM SKSDDDGTRL FGRSRTIQDL LLKVSRVAAT RVSVLVVGES GAGKDIVARL IHDMSPRRRG PFVPVNCGAI PKDIAESQLF GHEKGSFTGA VAQHVGMFEA ARGGTLFLDE IAEMPLELQV KLLRTLETNT IVRVGGHEAI PLDVRIVAAT HHDPVEALRS GALREDLFYR IAPIALHVPA LRQREDDVGD IALQIVERLN ARHRTRKRLS TQAMKALRAY TWPGNVRELR NTLERAFILA DEQIELQLPR RPPPREEVRH NAMTLHIGTT LAHTQQRFIV ASLRHFNGDK PRTAKALGIS LKTLYNRLAL LPESERNAAS GSAPPAANAS NGGSASTSPP ATMP
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